ncRNA ID | novel_zma_miR4440 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:155173844-155174043 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287161 |
Length | 24 |
Mature sequence(if miRNA) | 177 - GUGUCAUCUCUGAACACUCGGCAA - 200 |
Stem-loop(if miRNA) |
--        -C    UC  A         C     C      A               CA GU   C  C        GUUCUAAGU                AG   GCCGAGUG  CAGA  GU GGCACUCGG AAAGA GGCUUU CCGAGUGUCAACUGA  G  ACU GG AAAGAUCU         UCUUUGCCGAGUGCCA  G   ||||||||  ||||  || ||||||||| ||||| |||||| |||||||||||||||  |  ||| || ||||||||         ||||||||||||||||   CGGCUCAC  GUCU  UA CUGUGAGCC UUUCU UCGAAA GGCUCACAGUUGGCU  C  UGA CC UUUUUAGA         AGAAACGGCUCACGGU  A AA        AA    -C  -         A     C      C               AA UG   U  U        ---------                AG |
Stem-loop sequence | GCCGAGUGCCAGAUCGUAGGCACUCGGCAAAGACGGCUUUACCGAGUGUCAACUGACAGGUACUCGGCAAAGAUCUGUUCUAAGUUCUUUGCCGAGUGCCAAGGAGAUGGCACUCGGCAAAGAAGAUUUUUUCCUAGUGUCAAUCGGUUGACACUCGGCAAAGCUCUCUUUACCGAGUGUCAUCUCUGAACACUCGGCAA |