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BaseInfo

ncRNA ID novel_zma_miR4440
Species Zea mays
Class miRNA
Genome position Chr8:155173844-155174043 [+]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 177 - GUGUCAUCUCUGAACACUCGGCAA - 200
Stem-loop(if miRNA) --        -C    UC  A         C     C      A               CA GU   C  C        GUUCUAAGU                AG
  GCCGAGUG  CAGA  GU GGCACUCGG AAAGA GGCUUU CCGAGUGUCAACUGA  G  ACU GG AAAGAUCU         UCUUUGCCGAGUGCCA  G
  ||||||||  ||||  || ||||||||| ||||| |||||| |||||||||||||||  |  ||| || ||||||||         ||||||||||||||||
  CGGCUCAC  GUCU  UA CUGUGAGCC UUUCU UCGAAA GGCUCACAGUUGGCU  C  UGA CC UUUUUAGA         AGAAACGGCUCACGGU  A
AA        AA    -C  -         A     C      C               AA UG   U  U        ---------                AG
Stem-loop sequence GCCGAGUGCCAGAUCGUAGGCACUCGGCAAAGACGGCUUUACCGAGUGUCAACUGACAGGUACUCGGCAAAGAUCUGUUCUAAGUUCUUUGCCGAGUGCCAAGGAGAUGGCACUCGGCAAAGAAGAUUUUUUCCUAGUGUCAAUCGGUUGACACUCGGCAAAGCUCUCUUUACCGAGUGUCAUCUCUGAACACUCGGCAA