| ncRNA ID | novel_zma_miR4438 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr8:147182849-147183064 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR2287161;SRR2287165 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - CAGGCGAUGUUGAGCCGGUGU - 21 |
| Stem-loop(if miRNA) |
-- U A A G G G G G U CAGGCGAUG UGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUU AAAGCUGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| || || ||||||| GUCUGCUAC ACUCGGCCACAUGA ACAGGCCUACACACCAGUGUUUUAA UUUCGGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA UC AUGAUUC A CU C G A A G A G G U |
| Stem-loop sequence | CAGGCGAUGUUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUAAAAGCUGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCUGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACCGGCUCACCAUCGUCUGUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EU953037.1 |
|
2.5 | Zea mays clone 1376810 BSD domain containing protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| BT038785.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0325K05 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| NM_001146946.1 |
|
2.5 | Zea mays BSD domain containing protein (BSD6), mRNA | NA | coding protein | psRNATarget |