ncRNA ID | novel_zma_miR4429 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:25445-25644 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287161 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGGCCAUUGAUCGUUGACCAGA - 22 |
Stem-loop(if miRNA) |
-   -                   A    C      -             U   -  AA  A                      A  CCAACUCAAUUUUC  CUG UCAAUGAUCAAUGGCCGCA AACC CCAUUU UGUCGAAAAUAGC UGA CG  CA UUUUCAAUAAUACCGAAGGCUA GA              A  ||| ||||||||||||||||||| |||| |||||| ||||||||||||| ||| ||  || |||||||||||||||||||||| ||              C  GAC AGUUGCUAGUUACCGGUGU UUGG GGUAAA ACAGCUUUUAUCG ACU GC  GU AAAAGUUAUUAUGGUUUCCGAU UG              C A   C                   G    C      C             U   U  GG  -                      G  UAAGAACCUACAGA |
Stem-loop sequence | CUGUCAAUGAUCAAUGGCCGCAAAACCCCCAUUUUGUCGAAAAUAGCUUGACGAACAAUUUUCAAUAAUACCGAAGGCUAAGACCAACUCAAUUUUCACCAGACAUCCAAGAAUGUGUAGCCUUUGGUAUUAUUGAAAAUGGGCGUUCAUGCUAUUUUCGACACAAAUGGCGGUUGUGUGGCCAUUGAUCGUUGACCAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HI402929.1 |
|
1.5 | Sequence 1054 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB163390.1 |
|
1.5 | Sequence 1054 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ235059.1 |
|
1.5 | Sequence 1054 from Patent EP2985353 | NA | coding protein | psRNATarget |