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BaseInfo

ncRNA ID novel_zma_miR4425
Species Zea mays
Class miRNA
Genome position Chr7:86878881-86878975 [-]
Reference genome RefGen_v4
Source SRR1583941
Length 22
Mature sequence(if miRNA) 74 - CUUCUGCGCGGGUAGUCUUCGU - 95
Stem-loop(if miRNA) ---CU          U    -    -U   A AUU    UUUU  C    U
     UCUGCGCGGG AGUC UUCG  GGU G   UCGG    UU GCAC U
     |||||||||| |||| ||||  ||| |   ||||    || |||| G
     GGGCGCGUCU UCAG GGGU  CCA C   GGCC    GA CGUG U
CUGAU          -    C    UC   - GUC    ---U  U    U
Stem-loop sequence CUUCUGCGCGGGUAGUCUUCGUGGUAGAUUUCGGUUUUUUCGCACUUGUUGUGCUAGUCCGGCUGCACCCUUGGGCGACUUCUGCGCGGGUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU944083.1
ncRNA:22   UGCUUCUGAUGGGCGCGUCUUC   1
  *|*|=|=*||||||||||||||
targets:135   UCAAGGGGUACCCGCGCAGAAG   156

3.0 Zea mays clone 1706005 mRNA sequence NA coding protein psRNATarget
EU946549.1
ncRNA:22   UGCUUCUGAUGGGCGCGUCUUC   1
  *|*|=|=*||||||||||||||
targets:133   UCAAGGGGUACCCGCGCAGAAG   154

3.0 Zea mays clone 315958 mRNA sequence NA coding protein psRNATarget
BT041978.1
ncRNA:22   UGCUUCUGAUGGGCGCGUCUUC   1
  *|*|=|=*||||||||||||||
targets:115   UCAAGGGGUACCCGCGCAGAAG   136

3.0 Zea mays full-length cDNA clone ZM_BFb0094E12 mRNA, complete cds NA coding protein psRNATarget