Search result

BaseInfo

ncRNA ID novel_zma_miR4422
Species Zea mays
Class miRNA
Genome position Chr8:22814357-22814440 [+]
Reference genome RefGen_v4
Source SRR2287161;SRR2287164
Length 22
Mature sequence(if miRNA) 1 - ACACAAAGGACAAGAUGAAGGA - 22
Stem-loop(if miRNA) --A        AC    -   AG    CAG   CCACAAAUGG
   CACAAAGG  AAGA UGA  GAUG   UCU          A
   ||||||||  |||| |||  ||||   |||          G
   GUGUUUCU  UUCU ACU  UUAC   UCG          A
UUA        -A    U   CU    -CC   AGAUUUGAAA
Stem-loop sequence ACACAAAGGACAAGAUGAAGGAUGCAGUCUCCACAAAUGGAGAAAAGUUUAGAGCUCCCAUUUCUCAUUCUUAUCUUUGUGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008679900.2
ncRNA:22   AGGAAGUAGAACAGGAAACACA   1
  ||*|||*|||||||*|||||||
targets:1698   UCAUUCUUCUUGUCAUUUGUGU   1719

2.5 PREDICTED: Zea mays receptor protein kinase TMK1 (LOC103652907), mRNA NA coding protein psRNATarget