ncRNA ID | novel_zma_miR4417 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:109174564-109174744 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287161 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUACAGUGGUAGAGUAGGCAAUGA - 24 |
Stem-loop(if miRNA) |
--   A                         A           C            AAAAUACAA                 G   CAAAAA   AUU CCUACUCUACCACUGUAUAAAAUUU AAGUUCAAAUU AUCAUAUGUUAA         AAAAGAGAAAAUUGUGA AUA      A   ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||         ||||||||||||||||| |||      G   UAA GGAUGAGAUGGUGACAUAUUUUAAA UUCAAGUUUAA UAGUAUAUAAUU         UUUUUUCUUUUAAUACU UAU      U AG   C                         A           A            ----CUCUA                 A   UAAAAG |
Stem-loop sequence | AUUACCUACUCUACCACUGUAUAAAAUUUAAAGUUCAAAUUCAUCAUAUGUUAAAAAAUACAAAAAAGAGAAAAUUGUGAGAUACAAAAAAGUGAAAAUUAUAUCAUAAUUUUCUUUUUUAUCUCUUAAUAUAUGAUAAAUUUGAACUUAAAAUUUUAUACAGUGGUAGAGUAGGCAAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008657758.2 |
|
2.5 | PREDICTED: Zea mays methylesterase 7 (LOC103635265), mRNA | NA | coding protein | psRNATarget |