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BaseInfo

ncRNA ID	novel_zma_miR4409
Species	Zea mays
Class	miRNA
Genome position	Chr7:123069836-123069898 [+]
Reference genome	RefGen_v4
Source	SRR2287161
Length	24
Mature sequence(if miRNA)	1 - UACACUCGGCAAAGAACACUCGGC - 24
Stem-loop(if miRNA)	--U                A  CG  AAA       ACACUCGGCAAAGAAC CU  GC   GAUU    |||||||||||||||| ||  ||   |||U    UGUGAGCCGUUUCUUG GA  CG   CUAC AAU                G  AA  --G
Stem-loop sequence	UACACUCGGCAAAGAACACUCGGCAAAGAUUUCAUCGGCAAAGGGUUCUUUGCCGAGUGUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054268.1	ncRNA:24   CGGCUCACAAGAAACGGCUCACAU   1   ||**||*|*||||||||||||||* targets:1980   GCAAAGAGCUCUUUGCCGAGUGUU   2003 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   CGGCUCACAAGAAACGGCUCACAU   1   ||**||*|*||||||||||||||* targets:1980   GCAAAGAGCUCUUUGCCGAGUGUU   2003 Target Full Sequence	3.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
XM_008680068.2	ncRNA:24   CGGCUCACAAGAAACGGCUCACAU   1   |=||||**|||||||||||||||* targets:190   GUCGAGCCUUCUUUGCCGAGUGUU   213 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103653106 (LOC103653106), mRNA	NA	coding protein	psRNATarget
EU949560.1	ncRNA:24   CGGCUCACAAGAAACGGCUCACAU   1   ||**||*||||||||||||||||* targets:585   GCAAAGGGUUCUUUGCCGAGUGUU   608 Target Full Sequence	2.0	Zea mays clone 424771 mRNA sequence	NA	coding protein	psRNATarget
HI406693.1	ncRNA:24   CGGCUCACAAGAAACGGCUCACAU   1   ||**||*|*||||||||||||||* targets:100   GCAAAGAGCUCUUUGCCGAGUGUU   123 Target Full Sequence	3.0	Sequence 4818 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238823.1	ncRNA:24   CGGCUCACAAGAAACGGCUCACAU   1   ||**||*|*||||||||||||||* targets:100   GCAAAGAGCUCUUUGCCGAGUGUU   123 Target Full Sequence	3.0	Sequence 4818 from Patent EP2985353	NA	coding protein	psRNATarget
JB167154.1	ncRNA:24   CGGCUCACAAGAAACGGCUCACAU   1   ||**||*|*||||||||||||||* targets:100   GCAAAGAGCUCUUUGCCGAGUGUU   123 Target Full Sequence	3.0	Sequence 4818 from Patent EP2559767	NA	coding protein	psRNATarget