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BaseInfo

ncRNA ID	novel_zma_miR4402
Species	Zea mays
Class	miRNA
Genome position	Chr7:39887940-39888045 [+]
Reference genome	RefGen_v4
Source	SRR2287161;SRR3385575;SRR3385651;SRR3385660;SRR5105963
Length	21
Mature sequence(if miRNA)	1 - GGGGCGGACUGGGAACACAUG - 21
Stem-loop(if miRNA)	--      GA             GGAAUGAGA        U   U  G   U  U   C   GGGGCG  CUGGGAACACAUG         UGAGAUCA UGC CG UCG GC GGC U   ||||||  |||||||||||||         |||||||| ||| || ||| || |||   CCCCGC  GACUCUUGUGUAC         GUUCUAGU GCG GC GGC UG CCG G GC      UG             ---------        U   C  -   -  -   G
Stem-loop sequence	GGGGCGGACUGGGAACACAUGGGAAUGAGAUGAGAUCAUUGCUCGGUCGUGCUGGCCUGGGCCGUCGGCGCGCGUUGAUCUUGCAUGUGUUCUCAGGUCGCCCCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ237968.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:93   CAUGUGUUCCCAGUCCGCCCC   113 Target Full Sequence	0.0	Sequence 3963 from Patent EP2985353	NA	coding protein	psRNATarget
HI405838.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:93   CAUGUGUUCCCAGUCCGCCCC   113 Target Full Sequence	0.0	Sequence 3963 from Patent EP2074227	NA	coding protein	psRNATarget
JB166299.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:93   CAUGUGUUCCCAGUCCGCCCC   113 Target Full Sequence	0.0	Sequence 3963 from Patent EP2559767	NA	coding protein	psRNATarget
HI403375.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:94   CAUGUGUUCCCAGUCCGCCCC   114 Target Full Sequence	0.0	Sequence 1500 from Patent EP2074227	NA	coding protein	psRNATarget
JB163836.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:94   CAUGUGUUCCCAGUCCGCCCC   114 Target Full Sequence	0.0	Sequence 1500 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235204.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:94   CAUGUGUUCCCAGUCCGCCCC   114 Target Full Sequence	0.0	Sequence 1199 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235505.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:94   CAUGUGUUCCCAGUCCGCCCC   114 Target Full Sequence	0.0	Sequence 1500 from Patent EP2985353	NA	coding protein	psRNATarget
HI403074.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:94   CAUGUGUUCCCAGUCCGCCCC   114 Target Full Sequence	0.0	Sequence 1199 from Patent EP2074227	NA	coding protein	psRNATarget
JB163535.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:94   CAUGUGUUCCCAGUCCGCCCC   114 Target Full Sequence	0.0	Sequence 1199 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242312.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:96   CAUGUGUUCCCAGUCCGCCCC   116 Target Full Sequence	0.0	Sequence 8307 from Patent EP2985353	NA	coding protein	psRNATarget
HI410182.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:96   CAUGUGUUCCCAGUCCGCCCC   116 Target Full Sequence	0.0	Sequence 8307 from Patent EP2074227	NA	coding protein	psRNATarget
JB170643.1	ncRNA:21   GUACACAAGGGUCAGGCGGGG   1   ||||||||||||||||||||| targets:96   CAUGUGUUCCCAGUCCGCCCC   116 Target Full Sequence	0.0	Sequence 8307 from Patent EP2559767	NA	coding protein	psRNATarget