ncRNA ID | novel_zma_miR4381 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:47174628-47174721 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287161;SRR2287164;SRR2287165;SRR4237223;SRR4237227 |
Length | 22 |
Mature sequence(if miRNA) | 73 - GAAGCGCACAGAUGAAGUCGGG - 94 |
Stem-loop(if miRNA) |
--     G   G U               GUAG  G  G       U   CGGCU CAU U UGUGCUUCUCUUCUC    GU GG UGCUAAG G   ||||| ||| | |||||||||||||||    || || |||||||   GCUGA GUA A ACGCGAAGAGAAGAG    CA CC AUGAUUC A GG     A   G C               AAUA  G  G       U |
Stem-loop sequence | CGGCUGCAUGUUUGUGCUUCUCUUCUCGUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGUCGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538582.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538581.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |