Search result

BaseInfo

ncRNA ID	novel_zma_miR4371
Species	Zea mays
Class	miRNA
Genome position	Chr6:151392397-151392522 [-]
Reference genome	RefGen_v4
Source	SRR2287161;SRR4237222
Length	24
Mature sequence(if miRNA)	1 - UUGGGGUAGAACCGAACAUGGCCU - 24
Stem-loop(if miRNA)	--   -         -AU UU                 -AU   A UG  ACGGA    -   GAA   GCU UGUUCGGUU   U  CAAUCCAUAUGGAUUGG   GGA U  AU     UUAG AGG   U   ||| |||||||||   |  |||||||||||||||||   ||| |  ||     |||| |||   U   CGG ACAAGCCAA   G  GUUAGGUAUACCUAACU   CCU A  UA     GAUC UUC   U UC   U         GAU GG                 CCC   A GU  ---GG    A   AGU
Stem-loop sequence	GCUUGUUCGGUUAUUUUCAAUCCAUAUGGAUUGGAUGGAAUUGAUACGGAUUAGAGGGAAUUUUGACUUACUAGGGAUUGAAUCCCCCUCAAUCCAUAUGGAUUGGGGUAGAACCGAACAUGGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008658561.2	ncRNA:24   UCCGGUACAAGCCAAGAUGGGGUU   1   |||=||||||||||||||||=||| targets:209   AGGUCAUGUUCGGUUCUACCUCAA   232 Target Full Sequence	1.5	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase 2 (LOC103636208), mRNA	NA	coding protein	psRNATarget
EZ081763.1	ncRNA:24   UCCGGUACAAGCCAAGAUGGGGUU   1   |||=||||||||||||||||*||| targets:43   AGGUCAUGUUCGGUUCUACCACAA   66 Target Full Sequence	1.5	TSA: Zea mays contig17404, mRNA sequence	NA	coding protein	psRNATarget
EZ068230.1	ncRNA:24   UCCGGUACAAGCCAAGAUGGGGUU   1   |**|=|||||||||||||*||||| targets:28   ACACUAUGUUCGGUUCUAGCCCAA   51 Target Full Sequence	1.5	TSA: Zea mays contig03865, mRNA sequence	NA	coding protein	psRNATarget