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BaseInfo

ncRNA ID	novel_zma_miR4365
Species	Zea mays
Class	miRNA
Genome position	Chr5:88290905-88291010 [+]
Reference genome	RefGen_v4
Source	SRR2287161;SRR5451006;SRR2089698;SRR2089700;SRR2089702
Length	24
Mature sequence(if miRNA)	1 - CAUCUGGACUGGGACACGCGGCGA - 24
Stem-loop(if miRNA)	--        CU GG CA GCG   -    ---UUUAC        CCAGG     C   CAUCUGGA  G  A  C   GCG ACAA        UUGUCGGU     GACCC C   ||||||||  |  |  |   ||| ||||        ||||||||     |||||   GUAGACUU  C  U  G   CGU UGUU        AACAGCCG     CUGGG U GC        -- UU AG --A   A    UUUACUAC        CAAAG     A
Stem-loop sequence	CAUCUGGACUGGGACACGCGGCGACAAUUUACUUGUCGGUCCAGGGACCCCCUAGGGUCGAAACGCCGACAACAUCAUUUUUGUAUGCAGGAUUUCUUCAGAUGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546720.1	ncRNA:24   AGCGGCGCACAGGGUCAGGUCUAC   1   ||||||||||||||||*||||||| targets:6515   UCGCCGCGUGUCCCAGCCCAGAUG   6538 Target Full Sequence	1.5	PREDICTED: Zea mays dirigent protein 1 (LOC100285699), mRNA	NA	coding protein	psRNATarget
BT036940.1	ncRNA:24   AGCGGCGCACAGGGUCAGGUCUAC   1   ||||||||||*|||||*||||||| targets:896   UCGCCGCGUGCCCCAGCCCAGAUG   919 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0148D20 mRNA, complete cds	NA	coding protein	psRNATarget
EU940966.1	ncRNA:24   AGCGGCGCACAGGGUCAGGUCUAC   1   *=||=|||||*|||||*||||||| targets:608   GUGCUGCGUGCCCCAGCCCAGAUG   631 Target Full Sequence	2.5	Zea mays clone 1223688 mRNA sequence	NA	coding protein	psRNATarget
EU952144.1	ncRNA:24   AGCGGCGCACAGGGUCAGGUCUAC   1   *=||=|||||*|||||*||||||| targets:1314   GUGCUGCGUGCCCCAGCCCAGAUG   1337 Target Full Sequence	2.5	Zea mays clone 1212406 mRNA sequence	NA	coding protein	psRNATarget