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BaseInfo

ncRNA ID novel_zma_miR4361
Species Zea mays
Class miRNA
Genome position Chr9:21348574-21348626 [+]
Reference genome RefGen_v4
Source SRR1618882;SRR1618883;SRR4237222;SRR4237226;SRR4237227;SRR5099742;SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 30 - ACCGAGAGUAGGACUUUGACGAGU - 53
Stem-loop(if miRNA) -UA       U            AUA
   UGUCGAA GUCCUACUCUCG   C
   ||||||| ||||||||||||   G
   GCAGUUU CAGGAUGAGAGC   U
UGA       -            CAU
Stem-loop sequence UAUGUCGAAUGUCCUACUCUCGAUACGUUACCGAGAGUAGGACUUUGACGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241867.1
ncRNA:24   UGAGCAGUUUCAGGAUGAGAGCCA   1
  |||||*||*|||||||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.0 Sequence 7862 from Patent EP2985353 NA coding protein psRNATarget
HI409737.1
ncRNA:24   UGAGCAGUUUCAGGAUGAGAGCCA   1
  |||||*||*|||||||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.0 Sequence 7862 from Patent EP2074227 NA coding protein psRNATarget
JB170198.1
ncRNA:24   UGAGCAGUUUCAGGAUGAGAGCCA   1
  |||||*||*|||||||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.0 Sequence 7862 from Patent EP2559767 NA coding protein psRNATarget