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BaseInfo

ncRNA ID osa-miRf10033-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUGUUCGGCUGCAGCAGUGC - NA
Stem-loop(if miRNA) U    G        -U       U  ---       UAUACGAACA  GAAGCAAGCUUU
 GGGU UGUUCGGC  GCAGCAG GC   UGCAGCC          GU            C
 |||| ||||||||  ||||||| ||   |||||||          ||
 CCCA ACAAGCCG  CGUCGUC CG   ACGUCGG          CG            A
A    G        UC       -  UCC       ------CGAC  GAAAAAACGAAC
Stem-loop sequence UGGGUGUGUUCGGCUGCAGCAGUGCUGCAGCCUAUACGAACAGUGAAGCAAGCUUUCACAAGCAAAAAAGGCCAGCGGCUGCACCUGCCUGCUGCCUGCCGAACAGACCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015795586.1
ncRNA:20   CGUGACGACGUCGGCUUGUG   1
  *||||||||||||||*||||
targets:1682   UCACUGCUGCAGCCGCACAC   1701

1.5 PREDICTED: Oryza sativa Japonica Group AT-hook motif nuclear-localized protein 1 (LOC4344529), mRNA AT-hook motif nuclear-localized protein 1(LOC4344529) coding protein psRNATarget
AK068379.1
ncRNA:20   CGUGACGACGUCGGCUUGUG   1
  *||||||||||||||*||||
targets:1478   UCACUGCUGCAGCCGCACAC   1497

1.5 Oryza sativa Japonica Group cDNA clone:J013146N22, full insert sequence NA coding protein psRNATarget