Search result

BaseInfo

ncRNA ID novel_zma_miR4359
Species Zea mays
Class miRNA
Genome position Chr5:23869864-23869923 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 22
Mature sequence(if miRNA) 39 - UUGAUCUCUACGUCGGAGGCGU - 60
Stem-loop(if miRNA) --    U     -    G     G   -C  A
  UUGA CUCUA CGUC GAGGC UCC  CA A
  |||| ||||| |||| ||||| |||  ||
  AACU GAGAU GCAG CUCCG AGG  GU C
CG    -     C    G     -   CA  U
Stem-loop sequence UUGAUCUCUACGUCGGAGGCGUCCCCAAACUUGACGGAGCCUCGGACGCUAGAGUCAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538918.1
ncRNA:22   UGCGGAGGCUGCAUCUCUAGUU   1
  ||*||||||=||||||||||||
targets:721   ACUCCUCCGGCGUAGAGAUCAA   742

1.5 PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X2, mRNA NA coding protein psRNATarget