ncRNA ID | novel_zma_miR4357 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:42257543-42257636 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287161;SRR2287164;SRR2287165;SRR4237227 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GAAGCGCACAGAUGAAGUCGGG - 22 |
Stem-loop(if miRNA) |
--         A                    G  G  G       U   CGGCUUCAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G   ||||||||| |||||||||||||||||||| || || |||||||   GCUGAAGUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A GG         G                    A  G  G       U |
Stem-loop sequence | CGGCUUCAUAUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGUCGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538582.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538581.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |