ncRNA ID | osa-miRf10032-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GCUGGAGCUCAGUCAAACAG - NA |
Stem-loop(if miRNA) |
    C  -C         AC              CUCC GGGC GG  CUGUUUGGC  AGCUCCAGCUCCAG    A |||| ||  |||||||||  ||||||||||||||    C CUCG CU  GACAAACUG  UCGAGGUCGAGGUC    C     A  UU         AC              CUCC |
Stem-loop sequence | GGGCCGGCCUGUUUGGCACAGCUCCAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGUCAAACAGUUUCAGCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK101220.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:J033031C20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015768148.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group chorismate mutase 2 (LOC4328508), mRNA | chorismate mutase 2(LOC4328508) | coding protein | psRNATarget | |||||||||
XM_015775467.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group elongation of fatty acids protein 3-like (LOC4333830), mRNA | elongation of fatty acids protein 3-like(LOC4333830) | coding protein | psRNATarget |