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BaseInfo

ncRNA ID osa-miRf10032-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GCUGGAGCUCAGUCAAACAG - NA
Stem-loop(if miRNA)     C  -C         AC              CUCC
GGGC GG  CUGUUUGGC  AGCUCCAGCUCCAG    A
|||| ||  |||||||||  ||||||||||||||    C
CUCG CU  GACAAACUG  UCGAGGUCGAGGUC    C
    A  UU         AC              CUCC
Stem-loop sequence GGGCCGGCCUGUUUGGCACAGCUCCAGCUCCAGCUCCACCCCUCCUGGAGCUGGAGCUCAGUCAAACAGUUUCAGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK101220.1
ncRNA:20   GACAAACUGACUCGAGGUCG   1
  |||||||=||||||||||||
targets:1187   CUGUUUGGCUGAGCUCCAGC   1206

1.5 Oryza sativa Japonica Group cDNA clone:J033031C20, full insert sequence NA coding protein psRNATarget
XM_015768148.1
ncRNA:20   GACAAACUGACUCGAGGUCG   1
  |||||||=||||||||||||
targets:1216   CUGUUUGGCUGAGCUCCAGC   1235

1.5 PREDICTED: Oryza sativa Japonica Group chorismate mutase 2 (LOC4328508), mRNA chorismate mutase 2(LOC4328508) coding protein psRNATarget
XM_015775467.1
ncRNA:20   GACAAACUGACUCGAGGUCG   1
  =||||||=||||||||||||
targets:1945   UUGUUUGGCUGAGCUCCAGC   1964

1.5 PREDICTED: Oryza sativa Japonica Group elongation of fatty acids protein 3-like (LOC4333830), mRNA elongation of fatty acids protein 3-like(LOC4333830) coding protein psRNATarget