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BaseInfo

ncRNA ID	novel_zma_miR4348
Species	Zea mays
Class	miRNA
Genome position	Chr5:159124642-159124705 [-]
Reference genome	RefGen_v4
Source	SRR2287161
Length	24
Mature sequence(if miRNA)	41 - AAGUACUCGGCAAAGAAGGCUUUA - 64
Stem-loop(if miRNA)	--AAG             A     --   -  A      UACUCGGCAAAGA GGCUU  UAC CG U      ||||||||||||| |||||  ||| || G      GUGAGCCGUUUCU CCGAG  GUG GC C UUUUU             C     CC   U  A
Stem-loop sequence	AAGUACUCGGCAAAGAAGGCUUUACCGAUGCACGUGUGCCGAGCCCUCUUUGCCGAGUGUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407253.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   *||||||||||||||||||||||| targets:27   CAAAGCCUUCUUUGCCGAGUACUU   50 Target Full Sequence	0.0	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239383.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   *||||||||||||||||||||||| targets:27   CAAAGCCUUCUUUGCCGAGUACUU   50 Target Full Sequence	0.0	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget
JB167714.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   *||||||||||||||||||||||| targets:27   CAAAGCCUUCUUUGCCGAGUACUU   50 Target Full Sequence	0.0	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239097.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   *|||||**|||||||||||||||| targets:48   CAAAGCGCUCUUUGCCGAGUACUU   71 Target Full Sequence	2.0	Sequence 5092 from Patent EP2985353	NA	coding protein	psRNATarget
JB167428.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   *|||||**|||||||||||||||| targets:48   CAAAGCGCUCUUUGCCGAGUACUU   71 Target Full Sequence	2.0	Sequence 5092 from Patent EP2559767	NA	coding protein	psRNATarget
HI406967.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   *|||||**|||||||||||||||| targets:48   CAAAGCGCUCUUUGCCGAGUACUU   71 Target Full Sequence	2.0	Sequence 5092 from Patent EP2074227	NA	coding protein	psRNATarget
HI406772.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   ****|||||||||||||||||||* targets:93   GUCUGCCUUCUUUGCCGAGUACUA   116 Target Full Sequence	1.0	Sequence 4897 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238902.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   ****|||||||||||||||||||* targets:93   GUCUGCCUUCUUUGCCGAGUACUA   116 Target Full Sequence	1.0	Sequence 4897 from Patent EP2985353	NA	coding protein	psRNATarget
JB167233.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   ****|||||||||||||||||||* targets:93   GUCUGCCUUCUUUGCCGAGUACUA   116 Target Full Sequence	1.0	Sequence 4897 from Patent EP2559767	NA	coding protein	psRNATarget
BT067238.2	ncRNA:24   AUU-UCGGAAGAAACGGCUCAUGAA   1   |=|-|*||||||||||||*|||||* targets:702   UGACACCCUUCUUUGCCGCGUACUC   726 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0338A23 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020541776.1	ncRNA:24   AUUUCGGAAGAAACGGCUCAUGAA   1   |=|=*|||||*|||||||||*||| targets:168   UGAGUCCUUCGUUGCCGAGUCCUU   191 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109941233 (LOC109941233), mRNA	NA	coding protein	psRNATarget