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BaseInfo

ncRNA ID	novel_zma_miR4345
Species	Zea mays
Class	miRNA
Genome position	Chr5:216921347-216921468 [-]
Reference genome	RefGen_v4
Source	SRR2287161
Length	24
Mature sequence(if miRNA)	99 - ACUGUUUGCAUAGUGGAGUUUGAA - 122
Stem-loop(if miRNA)	--      UG  -UAG   A          A       A      -        ----CAG  A   ACUGUU  CA    UGG GUUUGAAUAU GGUAUGA GAUGGG UAAGCUGC       AG U   ||||||  ||    ||| |||||||||| ||||||| |||||| ||||||||       || A   UGACAA  GU    ACC CAAACUUAUA CCAUAUU CUACCC AUUCGACG       UC U UG      GU  CCCA   -          C       C      C        ACCAGAA  C
Stem-loop sequence	ACUGUUUGCAUAGUGGAGUUUGAAUAUAGGUAUGAAGAUGGGUAAGCUGCCAGAGAUAUCCUAAGACCAGCAGCUUACCCCAUCCUUAUACCCAUAUUCAAACCCAACCCUGUGAACAGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU965596.1	ncRNA:24   AAGUUUGAGGUGAUACGUUUGUCA   1   |||||||||||||*|||||||||| targets:1182   UUCAAACUCCACUCUGCAAACAGU   1205 Target Full Sequence	1.5	Zea mays clone 287279 2-dehydro-3-deoxyphosphooctonate aldolase mRNA, complete cds	NA	coding protein	psRNATarget
XM_020550050.1	ncRNA:24   AAGUUUGAGGUGAUACGUUUGUCA   1   ||||||||=||||*|||||||||| targets:1053   UUCAAACUUCACUCUGCAAACAGU   1076 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC541932 (umc1540), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU973749.1	ncRNA:24   AAGUUUGAGGUGAUACGUUUGUCA   1   ||||||||*|=||||||||||||| targets:141   UUCAAACUGCGCUAUGCAAACAGU   164 Target Full Sequence	2.0	Zea mays clone 407975 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget