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BaseInfo

ncRNA ID novel_zma_miR4318
Species Zea mays
Class miRNA
Genome position Chr4:157419789-157419908 [-]
Reference genome RefGen_v4
Source SRR2287161
Length 24
Mature sequence(if miRNA) 1 - AAGUGAGGCUGCGAUCCAAACAUG - 24
Stem-loop(if miRNA) --       U   UG   -A   A  C       UA CUAAGGUUAGUCGUUCGAAUUGAA
  UGUUUGG UCG  GCU  ACU UG CACACUU  C                        A
  ||||||| |||  |||  ||| || |||||||  |                        A
  ACAAACC AGC  CGG  UGA AC GUGUGAA  C                        A
GU       U   GU   AG   -  A       -A GGAUUGAAAAUACGGAUUCCAAUC
Stem-loop sequence UGUUUGGUUCGUGGCUAACUAUGCCACACUUUACCUAAGGUUAGUCGUUCGAAUUGAAAAACUAACCUUAGGCAUAAAAGUUAGGCAAAGUGUGACAAGUGAGGCUGCGAUCCAAACAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT065116.1
ncRNA:24   GUACAAACCUAGCGUCGGAGUGAA   1
  |||||||||||||=||||||||||
targets:966   CAUGUUUGGAUCGUAGCCUCACUU   989

1.5 Zea mays full-length cDNA clone ZM_BFb0044I08 mRNA, complete cds NA coding protein psRNATarget