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BaseInfo

ncRNA ID novel_zma_miR4315
Species Zea mays
Class miRNA
Genome position Chr4:30920512-30920619 [-]
Reference genome RefGen_v4
Source SRR2287160;SRR5451003;SRR1997866
Length 24
Mature sequence(if miRNA) 1 - ACUAAAAUGGAAUAAAAUGAUGGG - 24
Stem-loop(if miRNA) -   -                    CCA                        AC
 CUA CAUUUUAUUCCAUUUUAGUU   AAAUUGUCAAAUAUAGAAACUAAA  U
 ||| ||||||||||||||||||||   ||||||||||||||||||||||||
 GGU GUAAAAUAAGGUAAAAUCAG   UUUAACGGUUUAUAUCUUUGAUUU  A
G   A                    AUA                        AU
Stem-loop sequence CUACAUUUUAUUCCAUUUUAGUUCCAAAAUUGUCAAAUAUAGAAACUAAAACUAUAUUUAGUUUCUAUAUUUGGCAAUUUAUAGACUAAAAUGGAAUAAAAUGAUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020547858.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||||||||||||||=||||||||
targets:1571   CCCAUCAUUUUAUUCUAUUUUAGU   1594

1.5 PREDICTED: Zea mays uncharacterized LOC100382535 (LOC100382535), transcript variant X3, mRNA NA coding protein psRNATarget
JB163514.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =|||||||||||||||||||||||
targets:33   UCCAUCAUUUUAUUCCAUUUUAGU   56

0.0 Sequence 1178 from Patent EP2559767 NA coding protein psRNATarget
JB163501.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||||||||||||||=||||||||
targets:34   CCCAUCAUUUUAUUCUAUUUUAGU   57

1.5 Sequence 1165 from Patent EP2559767 NA coding protein psRNATarget
HI403040.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||||||||||||||=||||||||
targets:34   CCCAUCAUUUUAUUCUAUUUUAGU   57

1.5 Sequence 1165 from Patent EP2074227 NA coding protein psRNATarget
HI403053.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =|||||||||||||||||||||||
targets:33   UCCAUCAUUUUAUUCCAUUUUAGU   56

0.0 Sequence 1178 from Patent EP2074227 NA coding protein psRNATarget
LQ235170.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||||||||||||||=||||||||
targets:34   CCCAUCAUUUUAUUCUAUUUUAGU   57

1.5 Sequence 1165 from Patent EP2985353 NA coding protein psRNATarget
LQ235183.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =|||||||||||||||||||||||
targets:33   UCCAUCAUUUUAUUCCAUUUUAGU   56

0.0 Sequence 1178 from Patent EP2985353 NA coding protein psRNATarget
XM_008654984.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||||||||||||||||||||||*
targets:2936   CCCAUCAUUUUAUUCCAUUUUAGA   2959

1.0 PREDICTED: Zea mays putative mixed-linked glucan synthase 1 (LOC103633281), mRNA NA coding protein psRNATarget
NM_001174830.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||||||||||
targets:2102   CCCUUCAUUUUAUUCCAUUUUAGU   2125

0.0 Zea mays Tubulin binding cofactor C domain-containing protein (LOC100382067), mRNA NA coding protein psRNATarget
BT063047.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||||||||||
targets:2102   CCCUUCAUUUUAUUCCAUUUUAGU   2125

0.0 Zea mays full-length cDNA clone ZM_BFc0019F15 mRNA, complete cds NA coding protein psRNATarget
LQ235182.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||||||||||
targets:32   CCCUUCAUUUUAUUCCAUUUUAGU   55

0.0 Sequence 1177 from Patent EP2985353 NA coding protein psRNATarget
HI403052.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||||||||||
targets:32   CCCUUCAUUUUAUUCCAUUUUAGU   55

0.0 Sequence 1177 from Patent EP2074227 NA coding protein psRNATarget
JB163513.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||||||||||
targets:32   CCCUUCAUUUUAUUCCAUUUUAGU   55

0.0 Sequence 1177 from Patent EP2559767 NA coding protein psRNATarget
BT019141.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||||||||||||||||||||||**
targets:173   CCCAUCAUUUUAUUCCAUUUUAAA   196

2.5 Zea mays clone Contig786.F mRNA sequence NA coding protein psRNATarget
BT019141.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**|||||||||||||||||||
targets:297   CCCUCCAUUUUAUUCCAUUUUAGU   320

0.0 Zea mays clone Contig786.F mRNA sequence NA coding protein psRNATarget
LQ238843.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||||||||||||||||||||||**
targets:48   CCCAUCAUUUUAUUCCAUUUUAAA   71

2.5 Sequence 4838 from Patent EP2985353 NA coding protein psRNATarget
LQ238843.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**|||||||||||||||||||
targets:172   CCCUCCAUUUUAUUCCAUUUUAGU   195

0.0 Sequence 4838 from Patent EP2985353 NA coding protein psRNATarget
JB167174.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||||||||||||||||||||||**
targets:48   CCCAUCAUUUUAUUCCAUUUUAAA   71

2.5 Sequence 4838 from Patent EP2559767 NA coding protein psRNATarget
JB167174.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**|||||||||||||||||||
targets:172   CCCUCCAUUUUAUUCCAUUUUAGU   195

0.0 Sequence 4838 from Patent EP2559767 NA coding protein psRNATarget
HI406713.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||||||||||||||||||||||**
targets:48   CCCAUCAUUUUAUUCCAUUUUAAA   71

2.5 Sequence 4838 from Patent EP2074227 NA coding protein psRNATarget
HI406713.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**|||||||||||||||||||
targets:172   CCCUCCAUUUUAUUCCAUUUUAGU   195

0.0 Sequence 4838 from Patent EP2074227 NA coding protein psRNATarget
NM_001112512.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:1671   CCCUUCAUUUUAUUCUAUUUUAGU   1694

1.5 Zea mays Aldose reductase (pco147797a), mRNA NA coding protein psRNATarget
NM_001112512.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=|-||||||||||=||||||||
targets:1575   CCUA-CAUUUUAUUCUAUUUUAGU   1597

1.5 Zea mays Aldose reductase (pco147797a), mRNA NA coding protein psRNATarget
XM_008680551.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:841   CCCUUCAUUUUAUUCUAUUUUAGU   864

1.5 PREDICTED: Zea mays Plant-specific domain TIGR01589 family protein (pco120805), transcript variant X1, mRNA NA coding protein psRNATarget
JB163502.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||=||||||||||||
targets:32   CCCUUCAUUUUGUUCCAUUUUAGU   55

1.5 Sequence 1166 from Patent EP2559767 NA coding protein psRNATarget
JB163516.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:32   CCCUUCAUUUUAUUCUAUUUUAGU   55

1.5 Sequence 1180 from Patent EP2559767 NA coding protein psRNATarget
LQ235185.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:32   CCCUUCAUUUUAUUCUAUUUUAGU   55

1.5 Sequence 1180 from Patent EP2985353 NA coding protein psRNATarget
HI403055.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:32   CCCUUCAUUUUAUUCUAUUUUAGU   55

1.5 Sequence 1180 from Patent EP2074227 NA coding protein psRNATarget
HI403041.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||=||||||||||||
targets:32   CCCUUCAUUUUGUUCCAUUUUAGU   55

1.5 Sequence 1166 from Patent EP2074227 NA coding protein psRNATarget
LQ235171.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||=||||||||||||
targets:32   CCCUUCAUUUUGUUCCAUUUUAGU   55

1.5 Sequence 1166 from Patent EP2985353 NA coding protein psRNATarget
LQ235180.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:32   CCCUUCAUUUUAUUCUAUUUUAGU   55

1.5 Sequence 1175 from Patent EP2985353 NA coding protein psRNATarget
JB163511.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:32   CCCUUCAUUUUAUUCUAUUUUAGU   55

1.5 Sequence 1175 from Patent EP2559767 NA coding protein psRNATarget
HI403050.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*|||||||||||=||||||||
targets:32   CCCUUCAUUUUAUUCUAUUUUAGU   55

1.5 Sequence 1175 from Patent EP2074227 NA coding protein psRNATarget
XM_020542840.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=|-|||||||||||||||||||
targets:1003   CCUA-CAUUUUAUUCCAUUUUAGU   1025

0.0 PREDICTED: Zea mays hypothetical protein (LOC103636172), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553397.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=|-|||||||||||||||||||
targets:583   CCUA-CAUUUUAUUCCAUUUUAGU   605

0.0 PREDICTED: Zea mays SANT/MYB protein (LOC100284980), transcript variant X1, mRNA NA coding protein psRNATarget
LQ242410.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =||*|||||||=||||||||||||
targets:8   UCCUUCAUUUUGUUCCAUUUUAGU   31

1.5 Sequence 8405 from Patent EP2985353 NA coding protein psRNATarget
HI410280.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =||*|||||||=||||||||||||
targets:8   UCCUUCAUUUUGUUCCAUUUUAGU   31

1.5 Sequence 8405 from Patent EP2074227 NA coding protein psRNATarget
JB170741.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =||*|||||||=||||||||||||
targets:8   UCCUUCAUUUUGUUCCAUUUUAGU   31

1.5 Sequence 8405 from Patent EP2559767 NA coding protein psRNATarget
EU956227.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||*|||||||
targets:1272   CCCUUCAUUUUAUUCCUUUUUAGU   1295

1.5 Zea mays clone 1559264 mRNA sequence NA coding protein psRNATarget
BT036582.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =|=|-|||||||||||||||||||
targets:846   UCUA-CAUUUUAUUCCAUUUUAGU   868

0.0 Zea mays full-length cDNA clone ZM_BFb0124H18 mRNA, complete cds NA coding protein psRNATarget
NM_001139183.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  =|=|-|||||||||||||||||||
targets:846   UCUA-CAUUUUAUUCCAUUUUAGU   868

0.0 Zea mays hypothetical protein (LOC100194130), mRNA NA coding protein psRNATarget
XM_008657966.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=|-||||||||||=||||||||
targets:1   CCUA-CAUUUUAUUCUAUUUUAGU   23

1.5 PREDICTED: Zea mays uncharacterized LOC103635535 (LOC103635535), transcript variant X1, mRNA NA coding protein psRNATarget
EU942443.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||*|||||||
targets:495   CCCUUCAUUUUAUUCCUUUUUAGU   518

1.5 Zea mays clone 1501876 mRNA sequence NA coding protein psRNATarget
EZ060524.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=|-||||||||||=||||||||
targets:75   CCUA-CAUUUUAUUCUAUUUUAGU   97

1.5 TSA: Zea mays contig61646, mRNA sequence NA coding protein psRNATarget
HI406419.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**|||||||||||||||||||
targets:81   CCCUCCAUUUUAUUCCAUUUUAGU   104

0.0 Sequence 4544 from Patent EP2074227 NA coding protein psRNATarget
JB166880.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**|||||||||||||||||||
targets:81   CCCUCCAUUUUAUUCCAUUUUAGU   104

0.0 Sequence 4544 from Patent EP2559767 NA coding protein psRNATarget
LQ238549.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**|||||||||||||||||||
targets:81   CCCUCCAUUUUAUUCCAUUUUAGU   104

0.0 Sequence 4544 from Patent EP2985353 NA coding protein psRNATarget
HI407221.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||*|||||||
targets:12   CCCUUCAUUUUAUUCCUUUUUAGU   35

1.5 Sequence 5346 from Patent EP2074227 NA coding protein psRNATarget
LQ239351.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||*|||||||
targets:12   CCCUUCAUUUUAUUCCUUUUUAGU   35

1.5 Sequence 5346 from Patent EP2985353 NA coding protein psRNATarget
JB167682.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||||||||*|||||||
targets:12   CCCUUCAUUUUAUUCCUUUUUAGU   35

1.5 Sequence 5346 from Patent EP2559767 NA coding protein psRNATarget
XM_020545045.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |=|--|||||||||||||||||||
targets:2156   CUC--CAUUUUAUUCCAUUUUAGU   2177

0.0 PREDICTED: Zea mays CAB2 (LOC100281582), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001320812.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |*|*||||||||||=|||||||||
targets:2403   CGCUUCAUUUUAUUUCAUUUUAGU   2426

1.5 Zea mays Protein HAPLESS 2 (LOC100274016), mRNA NA coding protein psRNATarget
XM_008669344.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |*|*||||||||||=|||||||||
targets:2049   CGCUUCAUUUUAUUUCAUUUUAGU   2072

1.5 PREDICTED: Zea mays Protein HAPLESS 2 (LOC100274016), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001148401.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |*|*||||||||||=|||||||||
targets:1921   CGCUUCAUUUUAUUUCAUUUUAGU   1944

1.5 Zea mays Protein HAPLESS 2 (LOC100274016), mRNA NA coding protein psRNATarget
BT061735.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |*|*||||||||||=|||||||||
targets:1921   CGCUUCAUUUUAUUUCAUUUUAGU   1944

1.5 Zea mays full-length cDNA clone ZM_BFb0178N21 mRNA, complete cds NA coding protein psRNATarget
BT069618.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |*|*||||||||||=|||||||||
targets:1570   CGCUUCAUUUUAUUUCAUUUUAGU   1593

1.5 Zea mays full-length cDNA clone ZM_BFb0195L03 mRNA, complete cds NA coding protein psRNATarget
HI403391.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  *||||||||||||||||||||
targets:1   UUCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1516 from Patent EP2074227 NA coding protein psRNATarget
LQ235561.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  *||||||||||||||||||||
targets:1   UUCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1556 from Patent EP2985353 NA coding protein psRNATarget
HI403431.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  *||||||||||||||||||||
targets:1   UUCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1556 from Patent EP2074227 NA coding protein psRNATarget
JB163852.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  *||||||||||||||||||||
targets:1   UUCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1516 from Patent EP2559767 NA coding protein psRNATarget
JB163892.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  *||||||||||||||||||||
targets:1   UUCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1556 from Patent EP2559767 NA coding protein psRNATarget
LQ235521.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  *||||||||||||||||||||
targets:1   UUCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1516 from Patent EP2985353 NA coding protein psRNATarget
XM_008660555.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=|-||||||||||||*||||||
targets:1921   CCUA-CAUUUUAUUCCACUUUAGU   1943

1.5 PREDICTED: Zea mays pentatricopeptide repeat protein PPR566-6 (LOC100381697), transcript variant X1, mRNA NA coding protein psRNATarget
HI403061.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=*|=||||||||||*|||||||
targets:32   CCUUUUAUUUUAUUCCUUUUUAGU   55

2.5 Sequence 1186 from Patent EP2074227 NA coding protein psRNATarget
LQ235191.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=*|=||||||||||*|||||||
targets:32   CCUUUUAUUUUAUUCCUUUUUAGU   55

2.5 Sequence 1186 from Patent EP2985353 NA coding protein psRNATarget
JB163522.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  ||=*|=||||||||||*|||||||
targets:32   CCUUUUAUUUUAUUCCUUUUUAGU   55

2.5 Sequence 1186 from Patent EP2559767 NA coding protein psRNATarget
HI403270.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1395 from Patent EP2074227 NA coding protein psRNATarget
LQ235549.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1544 from Patent EP2985353 NA coding protein psRNATarget
HI403309.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1434 from Patent EP2074227 NA coding protein psRNATarget
JB163770.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1434 from Patent EP2559767 NA coding protein psRNATarget
LQ235439.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1434 from Patent EP2985353 NA coding protein psRNATarget
LQ235400.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1395 from Patent EP2985353 NA coding protein psRNATarget
JB163731.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1395 from Patent EP2559767 NA coding protein psRNATarget
JB163880.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1544 from Patent EP2559767 NA coding protein psRNATarget
LQ235490.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1485 from Patent EP2985353 NA coding protein psRNATarget
JB163821.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1485 from Patent EP2559767 NA coding protein psRNATarget
HI403419.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1544 from Patent EP2074227 NA coding protein psRNATarget
HI403360.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1485 from Patent EP2074227 NA coding protein psRNATarget
HI403265.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1390 from Patent EP2074227 NA coding protein psRNATarget
LQ235395.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1390 from Patent EP2985353 NA coding protein psRNATarget
JB163726.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1390 from Patent EP2559767 NA coding protein psRNATarget
LQ235572.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1567 from Patent EP2985353 NA coding protein psRNATarget
LQ235547.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1542 from Patent EP2985353 NA coding protein psRNATarget
JB163903.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1567 from Patent EP2559767 NA coding protein psRNATarget
HI403417.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1542 from Patent EP2074227 NA coding protein psRNATarget
HI403442.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1567 from Patent EP2074227 NA coding protein psRNATarget
JB163878.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||||||||||||
targets:1   UCCAUUUUAUUCCAUUUUAGU   21

0.0 Sequence 1542 from Patent EP2559767 NA coding protein psRNATarget
XM_008647122.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**||||||||||||*||||||
targets:2992   CCCUCCAUUUUAUUCCACUUUAGU   3015

1.5 PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008647123.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**||||||||||||*||||||
targets:2603   CCCUCCAUUUUAUUCCACUUUAGU   2626

1.5 PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008651702.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**||||||||||||*||||||
targets:485   CCCUCCAUUUUAUUCCACUUUAGU   508

1.5 PREDICTED: Zea mays type IV inositol polyphosphate 5-phosphatase 3 (LOC103630655), transcript variant X3, mRNA NA coding protein psRNATarget
BT083492.2
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||*||||||*|||||*|||||||
targets:679   CCCUUCAUUUCAUUCCUUUUUAGU   702

2.5 Zea mays full-length cDNA clone ZM_BFb0003B18 mRNA, complete cds NA coding protein psRNATarget
EU957896.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |==|-||||||||||||*||||||
targets:1274   CUUA-CAUUUUAUUCCACUUUAGU   1296

1.5 Zea mays clone 1630391 mRNA sequence NA coding protein psRNATarget
EU945607.1
ncRNA:24   GGGUAGUAAAAUAAGGUAAAAUCA   1
  |||**||*||||||||||||||||
targets:146   CCCUCCAAUUUAUUCCAUUUUAGU   169

1.0 Zea mays clone 279279 mRNA sequence NA coding protein psRNATarget
LQ235501.1
ncRNA:20   AG-UAAAAUAAGGUAAAAUCA   1
  ||-||||||||||||||||||
targets:1   UCUAUUUUAUUCCAUUUUAGU   21

2.0 Sequence 1496 from Patent EP2985353 NA coding protein psRNATarget
HI403371.1
ncRNA:20   AG-UAAAAUAAGGUAAAAUCA   1
  ||-||||||||||||||||||
targets:1   UCUAUUUUAUUCCAUUUUAGU   21

2.0 Sequence 1496 from Patent EP2074227 NA coding protein psRNATarget
JB163832.1
ncRNA:20   AG-UAAAAUAAGGUAAAAUCA   1
  ||-||||||||||||||||||
targets:1   UCUAUUUUAUUCCAUUUUAGU   21

2.0 Sequence 1496 from Patent EP2559767 NA coding protein psRNATarget
HI403239.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||=|||||||||
targets:1   UCCAUUUUAUUUCAUUUUAGU   21

1.5 Sequence 1364 from Patent EP2074227 NA coding protein psRNATarget
LQ235369.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||=|||||||||
targets:1   UCCAUUUUAUUUCAUUUUAGU   21

1.5 Sequence 1364 from Patent EP2985353 NA coding protein psRNATarget
JB163700.1
ncRNA:21   UAGUAAAAUAAGGUAAAAUCA   1
  **|||||||||=|||||||||
targets:1   UCCAUUUUAUUUCAUUUUAGU   21

1.5 Sequence 1364 from Patent EP2559767 NA coding protein psRNATarget
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