Search result

BaseInfo

ncRNA ID novel_zma_miR4310
Species Zea mays
Class miRNA
Genome position Chr2:153494415-153494499 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 62 - GUGUUUAGCACUCGGUAAAGAGGC - 85
Stem-loop(if miRNA) -  -              U           ---A  --     UU
 CC CUUUGCCGAGUGUU GACACUCGGCA    AC  CAUUC  U
 || |||||||||||||| |||||||||||    ||  |||||
 GG GAAAUGGCUCACGA UUGUGAGCCGU    UG  GUGAG  G
C  A              U           GUCC  CC     CC
Stem-loop sequence CCCUUUGCCGAGUGUUUGACACUCGGCAAACCAUUCUUUGCCGAGUGCCGUCCUGUGCCGAGUGUUUAGCACUCGGUAAAGAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084785.2
ncRNA:24   CGGAGAAAUGGCUCACGAUUUGUG   1
  ***||||||||||||||*|||||*
targets:78   AAAUCUUUACCGAGUGCCAAACAG   101

2.5 Zea mays full-length cDNA clone ZM_BFb0180O09 mRNA, complete cds NA coding protein psRNATarget