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BaseInfo

ncRNA ID novel_zma_miR4308
Species Zea mays
Class miRNA
Genome position Chr4:165290250-165290314 [-]
Reference genome RefGen_v4
Source SRR2287160
Length 24
Mature sequence(if miRNA) 1 - AGGGACUGCACUGCGUACACCUUC - 24
Stem-loop(if miRNA) --  U  -    -    UGCU       UUCC   
  AG UG ACGC GUGC    GUUCUUC    CGGC
  || || |||| ||||    |||||||    |||G
  UC AC UGCG CACG    CAGGGAG    GCCA
CU  C  A    U    ---U       -CUU   
Stem-loop sequence AGUUGACGCGUGCUGCUGUUCUUCUUCCCGGCGACCGUUCGAGGGACUGCACUGCGUACACCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ109992.1
ncRNA:24   CUUCCACAUGCGUCACGUCAGGGA   1
  |*||*|||||||||||||||=||*
targets:97   GCAGAUGUACGCAGUGCAGUUCCA   120

2.5 TSA: Zea mays contig45652, mRNA sequence NA coding protein psRNATarget