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BaseInfo

ncRNA ID novel_zma_miR4307
Species Zea mays
Class miRNA
Genome position Chr4:187045005-187045072 [-]
Reference genome RefGen_v4
Source SRR2287160
Length 24
Mature sequence(if miRNA) 45 - GUUCUCUGGUCAGGCGCGGACGGU - 68
Stem-loop(if miRNA) --    U   -      -       G    AC   A
  GUUC CUG GUCAGG CGCGGAC GUCC  GGC C
  |||| ||| |||||| ||||||| ||||  ||| A
  CGAG GAC UGGUCC GCGCCUG CAGG  CUG G
CU    -   G      A       G    --   G
Stem-loop sequence GUUCUCUGGUCAGGCGCGGACGGUCCACGGCACAGGGUCGGACGGUCCGCGACCUGGUGCAGGAGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   UGGCAGGCGCGGACUGGUCUCUUG   1
  ||||||||||=|||||||||||=|
targets:26   ACCGUCCGCGUCUGACCAGAGAGC   49

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget