Search result

BaseInfo

ncRNA ID	novel_zma_miR4297
Species	Zea mays
Class	miRNA
Genome position	Chr2:141653302-141653358 [+]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647386
Length	24
Mature sequence(if miRNA)	1 - AAACCGACGAACUUAAUGUAAGUU - 24
Stem-loop(if miRNA)	--      A              -GUU C   AAACCG CGAACUUAAUGUAA    C U   |||||| ||||||||||||||    |   UUUGGC GCUUGAAUUACAUU    G C CG      A              AUUC G
Stem-loop sequence	AAACCGACGAACUUAAUGUAAGUUCCUCGGCUUAUUACAUUAAGUUCGACGGUUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ111937.1	ncRNA:24   UUGAAUGUAAUUCAAGCAGCCAAA   1   ***||||||||||||||*|||||| targets:37   UUAUUACAUUAAGUUCGACGGUUU   60 Target Full Sequence	1.5	TSA: Zea mays contig47598, mRNA sequence	NA	coding protein	psRNATarget
XM_008657922.2	ncRNA:24   UUG---AAUGUAAUUCAAGCAGCCAAA   1   =||---|||=||||||||||*|||||| targets:1036   GACCUAUUAUAUUAAGUUCGACGGUUU   1062 Target Full Sequence	2.5	PREDICTED: Zea mays protein ROOT HAIR DEFECTIVE 3 homolog 1-like (LOC103635485), mRNA	NA	coding protein	psRNATarget