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BaseInfo

ncRNA ID novel_zma_miR4285
Species Zea mays
Class miRNA
Genome position Chr3:96396418-96396469 [+]
Reference genome RefGen_v4
Source SRR2287160;SRR2287161;SRR2287164;SRR2287165
Length 24
Mature sequence(if miRNA) 29 - GGGGAUGUGAGUACAGCAAGGAUG - 52
Stem-loop(if miRNA) UCA      G    - -       GA
   UCUUGU GUAC C UGUCCUU  C
   |||||| |||| | |||||||
   GGAACG CAUG G GUAGGGG  C
GUA      A    A U       GU
Stem-loop sequence UCAUCUUGUGGUACCUGUCCUUGACCUGGGGGAUGUGAGUACAGCAAGGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU942555.1
ncRNA:24   GUAGGAACGACAUGAGUGUAGGGG   1
  ||||||||||||||||||||||||
targets:308   CAUCCUUGCUGUACUCACAUCCCC   331

0.0 Zea mays clone 1517947 mRNA sequence NA coding protein psRNATarget
BT083772.1
ncRNA:24   GUAGGAACGACAUGAGUGUAGGGG   1
  ||*|||||||*|||||||||||||
targets:1024   CACCCUUGCUAUACUCACAUCCCC   1047

1.0 Zea mays full-length cDNA clone ZM_BFb0038M24 mRNA, complete cds NA coding protein psRNATarget
EU947249.1
ncRNA:24   GUAGGAACGACAUGAGUGUAGGGG   1
  ||*|||||||*|||||||||||||
targets:1057   CACCCUUGCUAUACUCACAUCCCC   1080

1.0 Zea mays clone 334769 mRNA sequence NA coding protein psRNATarget