ncRNA ID | novel_zma_miR4274 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:151960793-151960864 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287160;SRR2089698 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUGUAGAAAACGGUACGGAUCG - 24 |
Stem-loop(if miRNA) |
--U     U        -      -U    UAAAUAC    UCCGU CUGUUUUC AUAUUU  UCCG       A    ||||| |||||||| ||||||  ||||    AGGCA GGCAAAAG UGUAAA  GGGC       G GCU     U        A      CU    UGGCAAA |
Stem-loop sequence | UUCCGUUCUGUUUUCAUAUUUUUCCGUAAAUACAGAAACGGUCGGGUCAAAUGUAGAAAACGGUACGGAUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008664386.2 |
|
2.5 | PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008664382.2 |
|
2.5 | PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020551120.1 |
|
2.5 | PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X2, mRNA | NA | coding protein | psRNATarget |