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BaseInfo

ncRNA ID novel_zma_miR4274
Species Zea mays
Class miRNA
Genome position Chr3:151960793-151960864 [-]
Reference genome RefGen_v4
Source SRR2287160;SRR2089698
Length 24
Mature sequence(if miRNA) 1 - AAAUGUAGAAAACGGUACGGAUCG - 24
Stem-loop(if miRNA) --U     U        -      -U    UAAAUAC
   UCCGU CUGUUUUC AUAUUU  UCCG       A
   ||||| |||||||| ||||||  ||||
   AGGCA GGCAAAAG UGUAAA  GGGC       G
GCU     U        A      CU    UGGCAAA
Stem-loop sequence UUCCGUUCUGUUUUCAUAUUUUUCCGUAAAUACAGAAACGGUCGGGUCAAAUGUAGAAAACGGUACGGAUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008664386.2
ncRNA:24   GCUAGGCAUGGCAAAAGAUGUAAA   1
  ||-|||||||=||||||*||||||
targets:1319   CG-UCCGUACUGUUUUCCACAUUU   1341

2.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008664382.2
ncRNA:24   GCUAGGCAUGGCAAAAGAUGUAAA   1
  ||-|||||||=||||||*||||||
targets:1411   CG-UCCGUACUGUUUUCCACAUUU   1433

2.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551120.1
ncRNA:24   GCUAGGCAUGGCAAAAGAUGUAAA   1
  ||-|||||||=||||||*||||||
targets:1066   CG-UCCGUACUGUUUUCCACAUUU   1088

2.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X2, mRNA NA coding protein psRNATarget