ncRNA ID | novel_zma_miR4264 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:212024962-212025109 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287160;SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCGGUGUUCUCUGGUCAGGCGCGG - 24 |
Stem-loop(if miRNA) |
--G   U    U   -      -       G    GC     A G   --A   G       A      GC   -   G    CGG GUUC CUG GUCAGG CGCGGAC GUCC  GGCCC G GCC   GAC GUCCGCG CCUGGC  GAG GCG C    ||| |||| ||| |||||| ||||||| ||||  ||||| | |||   ||| ||||||| ||||||  ||| |||    GCU CGAG GAC UGGUCC GCGCCUG CAGG  CCGGG C CGG   CUG CAGGCGC GGACUG  CUC CGU G UGG   -    -   G      A       G    --     A G   CGC   G       -      GU   U   G |
Stem-loop sequence | GCGGUGUUCUCUGGUCAGGCGCGGACGGUCCGCGGCCCAGGGCCAGACGGUCCGCGACCUGGCGCGAGGCGGCGGUGCUCUCUGGUCAGGCGCGGACGGUCCGCGGCGCAGGGCCGGACGGUCCGCGACCUGGUGCAGGAGCUCGGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ096610.1 |
|
2.5 | TSA: Zea mays contig32265, mRNA sequence | NA | coding protein | psRNATarget |