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BaseInfo

ncRNA ID novel_zma_miR4262
Species Zea mays
Class miRNA
Genome position Chr2:12058978-12059040 [+]
Reference genome RefGen_v4
Source SRR2287160;SRR2287165
Length 24
Mature sequence(if miRNA) 1 - GCAGAUGACAGAGCAGCGGACAAG - 24
Stem-loop(if miRNA) --    A  A   --        ACA  GU  UC
  GCAG UG CAG  AGCAGCGG   AG  GA  C
  |||| || |||  ||||||||   ||  ||
  CGUC AU GUC  UCGUCGCU   UC  CU  C
GU    -  C   GA        --G  UG  CU
Stem-loop sequence GCAGAUGACAGAGCAGCGGACAAGGUGAUCCCUCUCGUCUGUCGCUGCUAGCUGCUACUGCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008676232.2
ncRNA:24   GAACAGGCGACGAGACAGUAGACG   1
  |||--|=||||||||||||||||*
targets:1763   CUU--CUGCUGCUCUGUCAUCUGG   1784

2.0 PREDICTED: Zea mays transcription factor LHW-like (LOC103650673), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008676231.2
ncRNA:24   GAACAGGCGACGAGACAGUAGACG   1
  |||--|=||||||||||||||||*
targets:1791   CUU--CUGCUGCUCUGUCAUCUGG   1812

2.0 PREDICTED: Zea mays transcription factor LHW-like (LOC103650673), transcript variant X1, mRNA NA coding protein psRNATarget