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BaseInfo

ncRNA ID	novel_zma_miR4255
Species	Zea mays
Class	miRNA
Genome position	Chr1:3038107-3038180 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - AAUCUUCUCCAAUCCUGAAGGGGA - 24
Stem-loop(if miRNA)	--A      AA    A          AAAA     UA    CCUUUG  AUUG AGAGGAUUAA    GAAAU  G    ||||||  |||| ||||||||||    |||||    GGAAGU  UAAC UCUUCUAAUU    UUUUA  U AGG      CC    C          CUAC     UU
Stem-loop sequence	ACCUUUGAAAUUGAAGAGGAUUAAAAAAGAAAUUAGUUUAUUUUCAUCUUAAUCUUCUCCAAUCCUGAAGGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008679616.2	ncRNA:24   AGGGGAAGUCCUAACCUCUUCUAA   1   ||||||||=|||||||||=||||| targets:1146   UCCCCUUCGGGAUUGGAGGAGAUU   1169 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103652675 (LOC103652675), mRNA	NA	coding protein	psRNATarget
EZ060791.1	ncRNA:24   AGGGGAAGUCCUAACCUCUUCUAA   1   |***||||||*|||||=||||||| targets:81   UGGACUUCAGCAUUGGGGAAGAUU   104 Target Full Sequence	2.5	TSA: Zea mays contig61913, mRNA sequence	NA	coding protein	psRNATarget
BT018274.1	ncRNA:24   AGGGGAAGUCCUAACCUCUUCUAA   1   |***||||||*|||||=||||||| targets:1052   UGGACUUCAGCAUUGGGGAAGAUU   1075 Target Full Sequence	2.5	Zea mays clone EL01T0203E04.c mRNA sequence	NA	coding protein	psRNATarget
NM_001139146.1	ncRNA:24   AGGGGAAGUCCUAACCUCUUCUAA   1   |***||||||*|||||=||||||| targets:1069   UGGACUUCAGCAUUGGGGAAGAUU   1092 Target Full Sequence	2.5	Zea mays uncharacterized LOC100194092 (LOC100194092), mRNA	NA	coding protein	psRNATarget
BT036537.1	ncRNA:24   AGGGGAAGUCCUAACCUCUUCUAA   1   |***||||||*|||||=||||||| targets:1069   UGGACUUCAGCAUUGGGGAAGAUU   1092 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0122A22 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020544897.1	ncRNA:24   AGGGGAAGUCCUAACCUCUUCUAA   1   |***||||||*|||||=||||||| targets:1265   UGGACUUCAGCAUUGGGGAAGAUU   1288 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100194092 (LOC100194092), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU957726.1	ncRNA:24   AGGGGAAGUCCUAACCUCUUCUAA   1   |***||||||*|||||=||||||| targets:1113   UGGACUUCAGCAUUGGGGAAGAUU   1136 Target Full Sequence	2.5	Zea mays clone 1612989 mRNA sequence	NA	coding protein	psRNATarget