ncRNA ID | novel_zma_miR4250 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:64344209-64344340 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287160 |
Length | 22 |
Mature sequence(if miRNA) | 111 - UUUGAAUGUGGAAAAAAUGUCA - 132 |
Stem-loop(if miRNA) |
--     A           U   A     C      C  G              A    GAG   U   UUUGA UGUGGAAAAAA GUC UUUUG CCAUAA UG AAAGUCAAACCACC ACUU   UGC U   ||||| ||||||||||| ||| ||||| |||||| || |||||||||||||| ||||   |||   AAACU ACACCUUUUUU CAG AAAAC GGUGUU AC UUUCAGUUUGGUGG UGAG   ACG U CG     C           C   C     A      A  G              A    GGA   G |
Stem-loop sequence | UUUGAAUGUGGAAAAAAUGUCAUUUUGCCCAUAACUGGAAAGUCAAACCACCAACUUGAGUGCUUUGGCAAGGGAGUAGGUGGUUUGACUUUGCAAUUGUGGACAAAACGACCUUUUUUCCACACUCAAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ085058.1 |
|
2.5 | TSA: Zea mays contig20702, mRNA sequence | NA | coding protein | psRNATarget |