ncRNA ID | osa-miRf10021-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UCAGCGCCAUGCUAUUUGGCGC - NA |
Stem-loop(if miRNA) |
       A      UGUCAAC            ------   UACCACCGUGGAUG ACACCUC GCGCCA       UGGCGCUGAAUG      CCG              G ||||||| ||||||       ||||||||||||      |||              G UGUGGAG CGCGGU       ACCGCGACUUAC      CCG              A        C      UUAUCGU            AUACAA   UACGACUGAAUCGG |
Stem-loop sequence | ACACCUCAGCGCCAUGUCAACUGGCGCUGAAUGCCGUACCACCGUGGAUGGGAGGCUAAGUCAGCAUGCCAACAUACAUUCAGCGCCAUGCUAUUUGGCGCCGAGGUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK105004.2 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015766258.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA | uncharacterized LOC9269164(LOC9269164) | coding protein | psRNATarget | |||||||||
XM_015770638.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA | uncharacterized LOC4329649(LOC4329649) | coding protein | psRNATarget | |||||||||
XM_015770637.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA | uncharacterized LOC4329649(LOC4329649) | coding protein | psRNATarget |