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BaseInfo

ncRNA ID novel_zma_miR4205
Species Zea mays
Class miRNA
Genome position Chr1:133423170-133423235 [-]
Reference genome RefGen_v4
Source SRR2287160;SRR1997865;SRR1997866
Length 24
Mature sequence(if miRNA) 43 - GGAUUGGACUGUAGAGAGGUGGUG - 66
Stem-loop(if miRNA) --G    G            - UG     A   C
   GAUU GACUGUAGAGAG G  GUGAC UGC G
   |||| |||||||||||| |  ||||| |||
   CUGA UUGGCGUCUCUU C  UACUG AUG A
GAG    A            U GU     -   A
Stem-loop sequence GGAUUGGACUGUAGAGAGGUGGUGACAUGCCGAAGUAGUCAUUGCUUUCUCUGCGGUUAAGUCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545883.1
ncRNA:24   GUGGUGGAGAGAUGUCAGGUUAGG   1
  |||||||||||||||||=|||||*
targets:139   CACCACCUCUCUACAGUUCAAUCA   162

2.5 PREDICTED: Zea mays uncharacterized LOC109943076 (LOC109943076), mRNA NA coding protein psRNATarget