ncRNA ID | novel_zma_miR4204 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:59291751-59291883 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGAUAUCUUUGCCGAGUGCCAA - 24 |
Stem-loop(if miRNA) |
--               AGC            CCGCA  UA  --AA            -AGU    G   GGCACUCGGCAAAGA   CUUUGUCGAGUG     CU  GC    AGUCCUGCUCUC    AACG C   |||||||||||||||   ||||||||||||     ||  ||    ||||||||||||    ||||   CCGUGAGCCGUUUCU   GAAACGGUUCAC     GA  CG    UCAGGACGAGAG    UUGC A AA               AUA            AUAAG  CA  GCUC            CUGU    A |
Stem-loop sequence | GGCACUCGGCAAAGAAGCCUUUGUCGAGUGCCGCACUUAGCAAAGUCCUGCUCUCAGUAACGGCAACGUUUGUCGAGAGCAGGACUCUCGGCACAGGAAUACACUUGGCAAAGAUAUCUUUGCCGAGUGCCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT066616.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0040K19 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001175881.1 |
|
2.5 | Zea mays uncharacterized LOC100383219 (LOC100383219), mRNA | NA | coding protein | psRNATarget |