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BaseInfo

ncRNA ID	novel_zma_miR4203
Species	Zea mays
Class	miRNA
Genome position	Chr1:154094036-154094122 [-]
Reference genome	RefGen_v4
Source	SRR2287160
Length	24
Mature sequence(if miRNA)	64 - AAGACUGUCUCUAGCAAGUAGUGU - 87
Stem-loop(if miRNA)	--A     -GU    A           A     AGAGACGCAAA    AGACU   CUCU GCAAGUAGUGU AAAUA           C    |||||   |||| ||||||||||| |||||           C    UUUGA   GAGA CGUUUGUCACA UUUGU           U UAA     AGU    -           A     AACAGUAGAUA
Stem-loop sequence	AAGACUGUCUCUAGCAAGUAGUGUAAAAUAAGAGACGCAAACCUAUAGAUGACAAUGUUUAACACUGUUUGCAGAGUGAAGUUUAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU946197.1	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:263   UCAUAAAUUGCUGGAGACAGUCUU   286 Target Full Sequence	2.5	Zea mays clone 300375 mRNA sequence	NA	coding protein	psRNATarget
AY106996.1	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:470   UCAUAAAUUGCUGGAGACAGUCUU   493 Target Full Sequence	2.5	Zea mays PCO068905 mRNA sequence	NA	coding protein	psRNATarget
BT018104.1	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:873   UCAUAAAUUGCUGGAGACAGUCUU   896 Target Full Sequence	2.5	Zea mays clone EL01N0553C09.c mRNA sequence	NA	coding protein	psRNATarget
BT023981.1	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:1868   UCAUAAAUUGCUGGAGACAGUCUU   1891 Target Full Sequence	2.5	Zea mays clone EL01N0308E05 mRNA sequence	NA	coding protein	psRNATarget
EU952143.1	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:2471   UCAUAAAUUGCUGGAGACAGUCUU   2494 Target Full Sequence	2.5	Zea mays clone 1211771 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT066954.1	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:2520   UCAUAAAUUGCUGGAGACAGUCUU   2543 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0123C07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149007.2	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:2520   UCAUAAAUUGCUGGAGACAGUCUU   2543 Target Full Sequence	2.5	Zea mays tetratricopeptide repeat (TPR)-containing protein (pco068905), mRNA	NA	coding protein	psRNATarget
XM_008674323.2	ncRNA:24   UGUGAUGAACGAUCUCUGUCAGAA   1   *||=*|*|||||=||||||||||| targets:2760   UCAUAAAUUGCUGGAGACAGUCUU   2783 Target Full Sequence	2.5	PREDICTED: Zea mays tetratricopeptide repeat (TPR)-containing protein (pco068905), transcript variant X1, mRNA	NA	coding protein	psRNATarget