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BaseInfo

ncRNA ID novel_zma_miR4201
Species Zea mays
Class miRNA
Genome position Chr1:169643661-169643728 [-]
Reference genome RefGen_v4
Source SRR2287160;SRR2287161
Length 21
Mature sequence(if miRNA) 48 - AGCGGGCGGAUUUGCACGGCG - 68
Stem-loop(if miRNA) AGC   C   -UUU          UUCUU    C
   GGG GGA    GCACGGCGCG     GGGC G
   ||| |||    ||||||||||     ||||
   UCC CCU    CGUGCCGCGU     UCCG C
-CC   U   CUGU          CGCGU    C
Stem-loop sequence AGCGGGCGGAUUUGCACGGCGCGUUCUUGGGCCGCCGCCUUGCGCUGCGCCGUGCUGUCUCCUCCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008670525.2
ncRNA:21   GCGGCACGUUUAGGCGGGCGA   1
  |*||||*|||=||||||||||
targets:474   CCCCGUCCAAGUCCGCCCGCU   494

2.5 PREDICTED: Zea mays indole-3-acetic acid-induced protein ARG7 (LOC103645805), mRNA NA coding protein psRNATarget
EU969889.1
ncRNA:21   GCGGCACGUUUAGGCGGGCGA   1
  |*||||*|||=||||||||||
targets:477   CCCCGUCCAAGUCCGCCCGCU   497

2.5 Zea mays clone 336885 mRNA sequence NA coding protein psRNATarget