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BaseInfo

ncRNA ID	osa-miRf10017-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AGUCAUCUGUGACGGGUUAG - NA
Stem-loop(if miRNA)	A   CU  -     AUUUA         AGGUAACUAGUCAUCUGUGACGGGUU GGA  UA AACCC     AGGUGAGGU |||||||||||||||||||||||||| |||  || |||||     ||||||||A UCCAUUGAUCAGUGGACACUGCCCAA CUU  AU UUGGG     UCCACUCCA                           -   UU  C     CAGUG
Stem-loop sequence	AGGUAACUAGUCAUCUGUGACGGGUUAGGACUUAAACCCAUUUAAGGUGAGGUAACCUCACCUGUGACGGGUUCUAUUUUCAACCCGUCACAGGUGACUAGUUACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164315.1	ncRNA:20   GAUU--GGGCAGUGUCUACUGA   1   ||||--|||||||||||||||| targets:81   CUAAAGCCCGUCACAGAUGACU   102 Target Full Sequence	2.5	Sequence 1979 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235984.1	ncRNA:20   GAUU--GGGCAGUGUCUACUGA   1   ||||--|||||||||||||||| targets:81   CUAAAGCCCGUCACAGAUGACU   102 Target Full Sequence	2.5	Sequence 1979 from Patent EP2985353	NA	coding protein	psRNATarget
HI403854.1	ncRNA:20   GAUU--GGGCAGUGUCUACUGA   1   ||||--|||||||||||||||| targets:81   CUAAAGCCCGUCACAGAUGACU   102 Target Full Sequence	2.5	Sequence 1979 from Patent EP2074227	NA	coding protein	psRNATarget
HI403775.1	ncRNA:20   GAUU--GGGCAGUGUCUACUGA   1   ||||--|||||||||||||||| targets:86   CUAAAGCCCGUCACAGAUGACU   107 Target Full Sequence	2.5	Sequence 1900 from Patent EP2074227	NA	coding protein	psRNATarget
JB164236.1	ncRNA:20   GAUU--GGGCAGUGUCUACUGA   1   ||||--|||||||||||||||| targets:86   CUAAAGCCCGUCACAGAUGACU   107 Target Full Sequence	2.5	Sequence 1900 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235905.1	ncRNA:20   GAUU--GGGCAGUGUCUACUGA   1   ||||--|||||||||||||||| targets:86   CUAAAGCCCGUCACAGAUGACU   107 Target Full Sequence	2.5	Sequence 1900 from Patent EP2985353	NA	coding protein	psRNATarget
AK241950.1	ncRNA:20   GAUUGGGCAGUGUCUACUGA   1   |*|||||||||||||||||| targets:1028   CAAACCCGUCACAGAUGACU   1047 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J075091F02, full insert sequence	NA	coding protein	psRNATarget
XM_015758062.1	ncRNA:20   GAUUGGGCAGUGUCUACUGA   1   *||=|||*|||||||||||| targets:2773   AUAGCCCAUCACAGAUGACU   2792 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group wall-associated receptor kinase 2 (LOC9271894), mRNA	wall-associated receptor kinase 2(LOC9271894)	coding protein	psRNATarget
AK068923.1	ncRNA:20   GAUU-GGGCAGUGUCUACUGA   1   |||=-|||||||||||||||| targets:1218   CUAGGCCCGUCACAGAUGACU   1238 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence	NA	coding protein	psRNATarget
XM_015761270.1	ncRNA:20   GAUUGGGCAGUGUCUACUGA   1   =||||||||||*|||||||| targets:44   UUAACCCGUCAGAGAUGACU   63 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA	uncharacterized LOC9270068(LOC9270068)	coding protein	psRNATarget
XM_015780731.1	ncRNA:20   GAUUGGGCAGUGUCUACUGA   1   =*|||||*|||||||||||| targets:3885   UCAACCCAUCACAGAUGACU   3904 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC4335549), mRNA	receptor-like protein 12(LOC4335549)	coding protein	psRNATarget
XM_015759028.1	ncRNA:20   GAUUGGGCAGUGUCUACUGA   1   *|*|=|=||||||||||||| targets:924   GUUAUCUGUCACAGAUGACU   943 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group tubulin-folding cofactor D (LOC4349076), mRNA	tubulin-folding cofactor D(LOC4349076)	coding protein	psRNATarget
XM_015763577.1	ncRNA:20   GAUUGGGCAGUGUCUACUGA   1   *|*|||||||||||||||*| targets:1453   GUCACCCGUCACAGAUGAGU   1472 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA	probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605)	coding protein	psRNATarget