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BaseInfo

ncRNA ID novel_zma_miR4183
Species Zea mays
Class miRNA
Genome position Chr1:261192408-261192472 [+]
Reference genome RefGen_v4
Source SRR2287160;SRR2287161
Length 24
Mature sequence(if miRNA) 42 - GUUUGGUAAUCUGGAAUGGAGCGG - 65
Stem-loop(if miRNA) --       C  U    -     A       CG
  GUUCCAU CC GAUU CUAGG ACGGAGC  C
  ||||||| || |||| ||||| |||||||
  CGAGGUA GG CUAA GGUUU UGUCUUG  U
GG       A  U    U     G       UC
Stem-loop sequence GUUCCAUCCCUGAUUCUAGGAACGGAGCCGCUCUGUUCUGUGUUUGGUAAUCUGGAAUGGAGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542520.1
ncRNA:24   GGCGAGGUAAGGUCUAAUGGUUUG   1
  |*|||||=|||||||||||||||=
targets:1702   CGGCUCCGUUCCAGAUUACCAAAU   1725

2.0 PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA NA coding protein psRNATarget