ncRNA ID | novel_zma_miR4183 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:261192408-261192472 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287160;SRR2287161 |
Length | 24 |
Mature sequence(if miRNA) | 42 - GUUUGGUAAUCUGGAAUGGAGCGG - 65 |
Stem-loop(if miRNA) |
--       C  U    -     A       CG   GUUCCAU CC GAUU CUAGG ACGGAGC  C   ||||||| || |||| ||||| |||||||   CGAGGUA GG CUAA GGUUU UGUCUUG  U GG       A  U    U     G       UC |
Stem-loop sequence | GUUCCAUCCCUGAUUCUAGGAACGGAGCCGCUCUGUUCUGUGUUUGGUAAUCUGGAAUGGAGCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542520.1 |
|
2.0 | PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA | NA | coding protein | psRNATarget |