ncRNA ID | novel_zma_miR4182 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:21173131-21173197 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287160;SRR2287161;SRR2287164;SRR2287165;SRR1997865 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGGGUCAAGAAAGUAGAUGAAG - 22 |
Stem-loop(if miRNA) |
UGGGUCAAGAAAGUA           ---C   -     U                GAUGAAGAAGU    GAU GGGUA G                |||||||||||    ||| |||||                CUACUUCUUUA    CUG CCCAU A -----------GGAC           UGUA   U     U |
Stem-loop sequence | UGGGUCAAGAAAGUAGAUGAAGAAGUCGAUGGGUAUGAUUACCCUGUCAUGUAUUUCUUCAUCCAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008683221.2 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC100273430 (pco141670(283)), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008683220.2 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC100273430 (pco141670(283)), transcript variant X1, mRNA | NA | coding protein | psRNATarget |