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BaseInfo

ncRNA ID	novel_zma_miR4178
Species	Zea mays
Class	miRNA
Genome position	Chr9:1366504-1366553 [+]
Reference genome	RefGen_v4
Source	SRR2287160;SRR2287162;SRR2287163;SRR4237222
Length	24
Mature sequence(if miRNA)	27 - AUCGGACUGUCCGGUGGGUGGCAC - 50
Stem-loop(if miRNA)	--A    G        U       G    CCGU CACCGGAC GUCCGAU C    |||| |||||||| |||||||    GGUG GUGGCCUG CAGGCUA C CAC    G        U       C
Stem-loop sequence	ACCGUGCACCGGACUGUCCGAUGCCCAUCGGACUGUCCGGUGGGUGGCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI409932.1	ncRNA:24   CACGGUGGGUGGCCUGUCAGGCUA   1   |||--=||||||||||||||||=| targets:31   GUG--GCCCACCGGACAGUCCGGU   52 Target Full Sequence	2.5	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
JB170393.1	ncRNA:24   CACGGUGGGUGGCCUGUCAGGCUA   1   |||--=||||||||||||||||=| targets:31   GUG--GCCCACCGGACAGUCCGGU   52 Target Full Sequence	2.5	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:24   CACGGUGGGUGGCCUGUCAGGCUA   1   |||--=||||||||||||||||=| targets:31   GUG--GCCCACCGGACAGUCCGGU   52 Target Full Sequence	2.5	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
U41079.1	ncRNA:24   CACGGUGGGUGGCCUGUCAGGCUA   1   |||--||=||||||||||||||=| targets:26   GUG--ACUCACCGGACAGUCCGGU   47 Target Full Sequence	2.5	Zea mays copia-type retroelement PREM-2, partial sequence	NA	coding protein	psRNATarget
BT086229.2	ncRNA:24   CACGGUGGGUGGCCUGUCAGGCUA   1   |||--|*|||||||||||||||=| targets:649   GUG--AACCACCGGACAGUCCGGU   670 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget