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BaseInfo

ncRNA ID	novel_zma_miR4174
Species	Zea mays
Class	miRNA
Genome position	Chr9:151916808-151916895 [+]
Reference genome	RefGen_v4
Source	SRR2287160
Length	24
Mature sequence(if miRNA)	1 - AUACUUCCUCUGUUUCGUUUUAGU - 24
Stem-loop(if miRNA)	--                G                     GCAA   AUACUUCCUCUGUUUC UUUUAGUUGUCGCUGGAUAGU    A   |||||||||||||||| |||||||||||||||||||||   UAUGAGGGAGGCAAAG AAAAUCAACAGCGACCUAUCA    A AG                A                     AAUU
Stem-loop sequence	AUACUUCCUCUGUUUCGUUUUAGUUGUCGCUGGAUAGUGCAAAAUUAAACUAUCCAGCGACAACUAAAAAGAAACGGAGGGAGUAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ241364.1	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   |||||||*|||||=|||||||||| targets:64   ACUAAAAAGAAACGGAGGAAGUAU   87 Target Full Sequence	2.5	Sequence 7359 from Patent EP2985353	NA	coding protein	psRNATarget
HI409234.1	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   |||||||*|||||=|||||||||| targets:64   ACUAAAAAGAAACGGAGGAAGUAU   87 Target Full Sequence	2.5	Sequence 7359 from Patent EP2074227	NA	coding protein	psRNATarget
JB169695.1	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   |||||||*|||||=|||||||||| targets:64   ACUAAAAAGAAACGGAGGAAGUAU   87 Target Full Sequence	2.5	Sequence 7359 from Patent EP2559767	NA	coding protein	psRNATarget
EZ061772.1	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   |*|||||*|||||=|||||||||| targets:245   AAUAAAAAGAAACGGAGGAAGUAU   268 Target Full Sequence	2.5	TSA: Zea mays contig62894, mRNA sequence	NA	coding protein	psRNATarget
BT066329.1	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   **||||||||||||*||||||||* targets:1468   UGUAAAACGAAACACAGGAAGUAC   1491 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0283G14 mRNA, complete cds	NA	coding protein	psRNATarget
BT085678.1	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   **||||||||||||*||||||||* targets:2119   UGUAAAACGAAACACAGGAAGUAC   2142 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0046O11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008665776.2	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   **||||||||||||*||||||||* targets:2134   UGUAAAACGAAACACAGGAAGUAC   2157 Target Full Sequence	2.5	PREDICTED: Zea mays serrate RNA effector molecule (LOC732796), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001308505.1	ncRNA:24   UGAUUUUGCUUUGUCUCCUUCAUA   1   **||||||||||||*||||||||* targets:2280   UGUAAAACGAAACACAGGAAGUAC   2303 Target Full Sequence	2.5	Zea mays serrate RNA effector molecule (LOC732796), mRNA	NA	coding protein	psRNATarget