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BaseInfo

ncRNA ID	novel_zma_miR4173
Species	Zea mays
Class	miRNA
Genome position	Chr9:134359889-134359953 [+]
Reference genome	RefGen_v4
Source	SRR2287160
Length	24
Mature sequence(if miRNA)	1 - GAUUAUAGGGCAGCUCACUACGGU - 24
Stem-loop(if miRNA)	--           A    ACUACGGUGUAGUAU   GAUUAUAGGGC GCUC               A   ||||||||||| ||||   UUGAUAUCCCG UGAG               U UU           -    AGAGUUCACUGAGUU
Stem-loop sequence	GAUUAUAGGGCAGCUCACUACGGUGUAGUAUAUUUGAGUCACUUGAGAGAGUGCCCUAUAGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163409.1	ncRNA:24   UGGCAUCACUCGACGGGAUAUUAG   1   |||||||||=|||||||||||||| targets:100   ACCGUAGUGGGCUGCCCUAUAAUC   123 Target Full Sequence	1.0	Sequence 1073 from Patent EP2559767	NA	coding protein	psRNATarget
HI402948.1	ncRNA:24   UGGCAUCACUCGACGGGAUAUUAG   1   |||||||||=|||||||||||||| targets:100   ACCGUAGUGGGCUGCCCUAUAAUC   123 Target Full Sequence	1.0	Sequence 1073 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235078.1	ncRNA:24   UGGCAUCACUCGACGGGAUAUUAG   1   |||||||||=|||||||||||||| targets:100   ACCGUAGUGGGCUGCCCUAUAAUC   123 Target Full Sequence	1.0	Sequence 1073 from Patent EP2985353	NA	coding protein	psRNATarget
BT061162.2	ncRNA:24   UGGCAUCACUCGACGGGAUAUUAG   1   |||||||||=|||||||||||||| targets:1612   ACCGUAGUGGGCUGCCCUAUAAUC   1635 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0117D02 mRNA, complete cds	NA	coding protein	psRNATarget
EU952101.1	ncRNA:24   UGGCAUCACUCGACGGGAUAUUAG   1   |||||||||=|||||||||||||| targets:170   ACCGUAGUGGGCUGCCCUAUAAUC   193 Target Full Sequence	1.0	Zea mays clone 1164740 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget