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BaseInfo

ncRNA ID novel_zma_miR4170
Species Zea mays
Class miRNA
Genome position Chr1:83096016-83096081 [-]
Reference genome RefGen_v4
Source SRR1583944;SRR1583941;SRR1583943
Length 22
Mature sequence(if miRNA) 1 - CGUACUGGGUGACAAAUGCAGU - 22
Stem-loop(if miRNA) --           G  C A   -   UUAC    A
  UGCGUUUGUCA UC G ACG GCA    UGUG A
  ||||||||||| || | ||| |||    ||||
  ACGUAAACAGU GG C UGC CGU    AUAC U
UG           G  U A   U   ---U    U
Stem-loop sequence UGCGUUUGUCAGUCCGAACGGCAUUACUGUGAAUUCAUAUUGCUCGUACUGGGUGACAAAUGCAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169819.1
ncRNA:22   UGACGUAAACAGUGGGUCAUGC   1
  ||||||||||||||||=||||*
targets:71   ACUGCAUUUGUCACCCGGUACA   92

2.5 Sequence 7483 from Patent EP2559767 NA coding protein psRNATarget
HI409358.1
ncRNA:22   UGACGUAAACAGUGGGUCAUGC   1
  ||||||||||||||||=||||*
targets:71   ACUGCAUUUGUCACCCGGUACA   92

2.5 Sequence 7483 from Patent EP2074227 NA coding protein psRNATarget
LQ241488.1
ncRNA:22   UGACGUAAACAGUGGGUCAUGC   1
  ||||||||||||||||=||||*
targets:71   ACUGCAUUUGUCACCCGGUACA   92

2.5 Sequence 7483 from Patent EP2985353 NA coding protein psRNATarget