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BaseInfo

ncRNA ID	novel_zma_miR4161
Species	Zea mays
Class	miRNA
Genome position	Chr1:84532983-84533080 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - ACACUCGGCAAAAAACCUAUACCG - 24
Stem-loop(if miRNA)	-AUGUC    AC            -U    -G              ACG       AGGU  UUUGUCGAGUGU  UGGU  UGGCACUCGGCAAA   U       ||||  ||||||||||||  ||||  ||||||||||||||   G       UCCA  AAACGGCUCACA  ACCG  ACCGUGAGCCGUUU   U GCCAUA    AA            UU    AG              CUU
Stem-loop sequence	AUGUCAGGUACUUUGUCGAGUGUUUGGUGUGGCACUCGGCAAAACGUGUUUCUUUGCCGAGUGCCAGAGCCAUUACACUCGGCAAAAAACCUAUACCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238815.1	ncRNA:24   GCCAUAUCCAAAAAACGGCUCACA   1   |||||||||||*|||||||||||| targets:37   CGGUAUAGGUUCUUUGCCGAGUGU   60 Target Full Sequence	1.5	Sequence 4810 from Patent EP2985353	NA	coding protein	psRNATarget
JB167146.1	ncRNA:24   GCCAUAUCCAAAAAACGGCUCACA   1   |||||||||||*|||||||||||| targets:37   CGGUAUAGGUUCUUUGCCGAGUGU   60 Target Full Sequence	1.5	Sequence 4810 from Patent EP2559767	NA	coding protein	psRNATarget
HI406685.1	ncRNA:24   GCCAUAUCCAAAAAACGGCUCACA   1   |||||||||||*|||||||||||| targets:37   CGGUAUAGGUUCUUUGCCGAGUGU   60 Target Full Sequence	1.5	Sequence 4810 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:24   GCCAUAUCCAAAAAACGGCUCACA   1   |||||||||||*|||||||||||| targets:174   CGGUAUAGGUUCUUUGCCGAGUGU   197 Target Full Sequence	1.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
JB167423.1	ncRNA:24   GCCAUAUCCAAAAAACGGCUCACA   1   |||||||||||*|||||||||||| targets:174   CGGUAUAGGUUCUUUGCCGAGUGU   197 Target Full Sequence	1.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
HI406962.1	ncRNA:24   GCCAUAUCCAAAAAACGGCUCACA   1   |||||||||||*|||||||||||| targets:174   CGGUAUAGGUUCUUUGCCGAGUGU   197 Target Full Sequence	1.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
HI408565.1	ncRNA:21   AUAUCCAAAAAACGGCUCACA   1   **||||||*|||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGU   21 Target Full Sequence	1.5	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget
JB169026.1	ncRNA:21   AUAUCCAAAAAACGGCUCACA   1   **||||||*|||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGU   21 Target Full Sequence	1.5	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:21   AUAUCCAAAAAACGGCUCACA   1   **||||||*|||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGU   21 Target Full Sequence	1.5	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget