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BaseInfo

ncRNA ID novel_zma_miR4160
Species Zea mays
Class miRNA
Genome position Chr9:67967493-67967602 [-]
Reference genome RefGen_v4
Source SRR2287160
Length 24
Mature sequence(if miRNA) 1 - AAUAAACCCUUAUUUUCGGCGGCC - 24
Stem-loop(if miRNA) --  A  A         U              C  U  CA  GAC           A
  CC CC AAAAUAAGG UUUAUUUUCGGCGG UG GU  GU   UGCCGAAAAUA G
  || || ||||||||| |||||||||||||| || ||  ||   |||||||||||
  GG GG UUUUAUUCC AAAUAAGAGCCGCC AC CA  CA   ACGGCUUUUAU G
CC  C  C         C              -  -  -A  -AC           C
Stem-loop sequence CCACCAAAAAUAAGGUUUUAUUUUCGGCGGCUGUGUCAGUGACUGCCGAAAAUAAGGCUAUUUUCGGCACAACAACCACCGCCGAGAAUAAACCCUUAUUUUCGGCGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008652323.2
ncRNA:23   CGGCGGCUUUUAUUCCCAAAUAA   1
  *=*||=||||||||*||||||||
targets:1   AUGGCUGAAAAUAAUGGUUUAUU   23

2.5 PREDICTED: Zea mays uncharacterized LOC103631405 (LOC103631405), mRNA NA coding protein psRNATarget