ncRNA ID | novel_zma_miR4127 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:5212926-5213016 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287160 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCCGGGAUUCUGGGAGGAUCGGAG - 24 |
Stem-loop(if miRNA) |
---CCC                C      A       A      UA       GGGAUUCUGGGAGGAU GGAGGG AUUGAGG GGAAAU  G       |||||||||||||||| |||||| ||||||| ||||||       CUCUAGGACUCUCCUA CCUCCC UAACUCC CCUUUA  U CUGUUC                A      C       C      UU |
Stem-loop sequence | CCCGGGAUUCUGGGAGGAUCGGAGGGAAUUGAGGAGGAAAUUAGUUUAUUUCCCCCUCAAUCCCCUCCAAUCCUCUCAGGAUCUCCUUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020540504.1 |
|
0.0 | PREDICTED: Zea mays nucleolar RNA helicase 2 (LOC100281387), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020540503.1 |
|
0.0 | PREDICTED: Zea mays nucleolar RNA helicase 2 (LOC100281387), transcript variant X1, mRNA | NA | coding protein | psRNATarget |