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BaseInfo

ncRNA ID novel_zma_miR4126
Species Zea mays
Class miRNA
Genome position Chr7:48041987-48042089 [+]
Reference genome RefGen_v4
Source SRR2287160
Length 21
Mature sequence(if miRNA) 83 - UGGAAUAAUGCUGGUCUGGCU - 103
Stem-loop(if miRNA) --     G     -CUG      U   U    -   --UCUA  A C     AA
  CCAGG UAGCA    UCCAGG CGG GUUA AGA      CC C ACACC  C
  ||||| |||||    |||||| ||| |||| |||      || | |||||
  GGUCU GUCGU    AGGUCC GCC CGGU UCU      GG G UGUGG  U
UC     G     AAUA      -   U    C   UCUAAC  A U     GA
Stem-loop sequence CCAGGGUAGCACUGUCCAGGUCGGUGUUAAGAUCUACCACCACACCAACUAGGGUGUUGAGGCAAUCUUCUCUGGCUCCGCCUGGAAUAAUGCUGGUCUGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008666769.2
ncRNA:21   UCGGUCUGGUCGUAAUAAGGU   1
  **||||||||||||||||=||
targets:1118   CUCCAGACCAGCAUUAUUUCA   1138

1.5 PREDICTED: Zea mays uncharacterized LOC103643607 (LOC103643607), transcript variant X1, mRNA NA coding protein psRNATarget