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BaseInfo

ncRNA ID	osa-miRf10009-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUCUUAAGACGCUGCUUGCA - NA
Stem-loop(if miRNA)	C       AU               A CAU       AA AUUUU GCAAGCG  CGUCUUAAGAGCACC C   UAAAAAU  C ||||| |||||||  ||||||||||||||| |   ||||||| UAAAA CGUUCGU  GCAGAAUUCUCGUGG G   AUUUUUA  A      A       -C               C AAC       GC
Stem-loop sequence	AUUUUCGCAAGCGAUCGUCUUAAGAGCACCACCAUUAAAAAUAACACGAUUUUUACAAGCGGUGCUCUUAAGACGCUGCUUGCAAAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HQ895722.1	ncRNA:20   ACGUUCGUCGCAGAAUUCUC   1   |||||*|||||||||=|||| targets:1039   UGCAAUCAGCGUCUUGAGAG   1058 Target Full Sequence	2.5	Oryza sativa Japonica Group sucrose synthase 4 mRNA, complete cds	NA	coding protein	psRNATarget
JN944363.1	ncRNA:20   ACGUUCGUCGCAGAAUUCUC   1   |||||*|||||||||=|||| targets:1057   UGCAAUCAGCGUCUUGAGAG   1076 Target Full Sequence	2.5	Oryza sativa Japonica Group clone KCS091G07 sucrose synthase 2 mRNA, complete cds	NA	coding protein	psRNATarget
AK099406.1	ncRNA:20   ACGUUCGUCGCAGAAUUCUC   1   |||||*|||||||||=|||| targets:1090   UGCAAUCAGCGUCUUGAGAG   1109 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013001M19, full insert sequence	NA	coding protein	psRNATarget
XM_015776691.1	ncRNA:20   ACGUUCGUCGCAGAAUUCUC   1   |||||*|||||||||=|||| targets:1101   UGCAAUCAGCGUCUUGAGAG   1120 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group sucrose synthase 4 (LOC4332788), mRNA	sucrose synthase 4(LOC4332788)	coding protein	psRNATarget
AK102158.1	ncRNA:20   ACGUUCGUCGCAGAAUUCUC   1   |||||*|||||||||=|||| targets:1091   UGCAAUCAGCGUCUUGAGAG   1110 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033086F24, full insert sequence	NA	coding protein	psRNATarget