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BaseInfo

ncRNA ID novel_zma_miR4119
Species Zea mays
Class miRNA
Genome position Chr7:81821390-81821573 [-]
Reference genome RefGen_v4
Source SRR2287160
Length 24
Mature sequence(if miRNA) 1 - AGAGUGUAGUUUAAAUAUGGGUAU - 24
Stem-loop(if miRNA) --         C          A  C     AUAC           C    UA          -      U  A            AACUAC
  ACCCAUAUU AAACUACAUU UA AAAUA    AAUCUAUAAUG AAAA  GUGCAAAAUA UGUUUU GU ACCAUAUGGGUG      U
  ||||||||| |||||||||| || |||||    ||||||||||| ||||  |||||||||| |||||| || ||||||||||||      G
  UGGGUAUAA UUUGAUGUGA AU UUUAU    UUAGAUGUUAC UUUU  UACGUUUUAU ACAAAA CA UGGUAUAUCCAC      U
UA         A          G  A     AACA           A    GC          U      U  C            GUUACA
Stem-loop sequence ACCCAUAUUCAAACUACAUUAUACAAAUAAUACAAUCUAUAAUGCAAAAUAGUGCAAAAUAUGUUUUUGUAACCAUAUGGGUGAACUACUGUACAUUGCACCUAUAUGGUCACUAAAACAUUAUUUUGCAUCGUUUUACAUUGUAGAUUACAAUAUUUAUAGAGUGUAGUUUAAAUAUGGGUAU