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BaseInfo

ncRNA ID	osa-miRf10008-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GAUAUCUUUACUCCUGGUUG - NA
Stem-loop(if miRNA)	GAGAAC        C GACUAAAGAUAUCUUUACUCCUGGUUGUU      AACCGGGA U |||||||||||||||||||||||||||||      |||||||| CUGAUUUCUAUAGAAAUGAGGACCAACAA      UUGGCCCU A                              GAGUAC        G
Stem-loop sequence	GACUAAAGAUAUCUUUACUCCUGGUUGUUGAGAACAACCGGGACUAGUCCCGGUUCAUGAGAACAACCAGGAGUAAAGAUAUCUUUAGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288859.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |||||=|||||||||||||| targets:2222   CAACCGGGAGUAAAGAUAUC   2241 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090076J15, full insert sequence	NA	coding protein	psRNATarget
AK288859.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |||||=|||||||||||||| targets:2292   CAACCGGGAGUAAAGAUAUC   2311 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090076J15, full insert sequence	NA	coding protein	psRNATarget
AK288544.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   ||||||||||||||||*||| targets:1841   CAACCAGGAGUAAAGAAAUC   1860 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090046G24, full insert sequence	NA	coding protein	psRNATarget
XM_015755809.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:264   CCACCAGGAGUAAGGAUAUC   283 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346636 (LOC4346636), transcript variant X1, mRNA	uncharacterized LOC4346636(LOC4346636)	coding protein	psRNATarget
XM_015755810.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:334   CCACCAGGAGUAAGGAUAUC   353 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346636 (LOC4346636), transcript variant X2, mRNA	uncharacterized LOC4346636(LOC4346636)	coding protein	psRNATarget
XM_015793883.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:344   CCACCAGGAGUAAGGAUAUC   363 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281978 (LOC107281978), transcript variant X2, mRNA	uncharacterized LOC107281978(LOC107281978)	coding protein	psRNATarget
XM_015793645.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:481   CCACCAGGAGUAAGGAUAUC   500 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345811 (LOC4345811), transcript variant X2, mRNA	uncharacterized LOC4345811(LOC4345811)	coding protein	psRNATarget
XM_015763870.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:484   CCACCAGGAGUAAGGAUAUC   503 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279704 (LOC107279704), transcript variant X2, mRNA	uncharacterized LOC107279704(LOC107279704)	coding protein	psRNATarget
XM_015793629.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:504   CCACCAGGAGUAAGGAUAUC   523 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346027 (LOC4346027), transcript variant X2, mRNA	uncharacterized LOC4346027(LOC4346027)	coding protein	psRNATarget
AK107262.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:504   CCACCAGGAGUAAGGAUAUC   523 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-125-H02, full insert sequence	NA	coding protein	psRNATarget
XM_015793882.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:619   CCACCAGGAGUAAGGAUAUC   638 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281978 (LOC107281978), transcript variant X1, mRNA	uncharacterized LOC107281978(LOC107281978)	coding protein	psRNATarget
XM_015793644.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:756   CCACCAGGAGUAAGGAUAUC   775 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345811 (LOC4345811), transcript variant X1, mRNA	uncharacterized LOC4345811(LOC4345811)	coding protein	psRNATarget
XM_015763869.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:759   CCACCAGGAGUAAGGAUAUC   778 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279704 (LOC107279704), transcript variant X1, mRNA	uncharacterized LOC107279704(LOC107279704)	coding protein	psRNATarget
XM_015793628.1	ncRNA:20   GUUGGUCCUCAUUUCUAUAG   1   |*|||||||||||=|||||| targets:761   CCACCAGGAGUAAGGAUAUC   780 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346027 (LOC4346027), transcript variant X1, mRNA	uncharacterized LOC4346027(LOC4346027)	coding protein	psRNATarget