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BaseInfo

ncRNA ID novel_zma_miR4077
Species Zea mays
Class miRNA
Genome position Chr1:165090284-165090336 [-]
Reference genome RefGen_v4
Source SRR1583944;SRR2647221;SRR2647390;SRR2647467
Length 24
Mature sequence(if miRNA) 1 - AUUCGGUCUAUUCGGGUUCGGUUU - 24
Stem-loop(if miRNA) -AC           --A      AACU
   CCGAACCUGAA   ACCGAA    G
   |||||||||||   ||||||
   GGCUUGGGCUU   UGGCUU    A
UUU           AUC      AUCC
Stem-loop sequence ACCCGAACCUGAAAACCGAAAACUGACCUAUUCGGUCUAUUCGGGUUCGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001146953.1
ncRNA:24   UUUGGCUUGGGCUUAUCUGGCUUA   1
  ||*|||||||||||||||||||||
targets:1735   AACCCGAACCCGAAUAGACCGAAU   1758

0.0 Zea mays NEP-interacting protein 1 (umc1737), mRNA NA coding protein psRNATarget
BT062901.1
ncRNA:24   UUUGGCUUGGGCUUAUCUGGCUUA   1
  ||*|||||||||||||||||||||
targets:1735   AACCCGAACCCGAAUAGACCGAAU   1758

0.0 Zea mays full-length cDNA clone ZM_BFc0005M05 mRNA, complete cds NA coding protein psRNATarget